BLASTX nr result

ID: Cephaelis21_contig00017483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017483
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556534.1| PREDICTED: syntaxin-43-like [Glycine max]          78   9e-13
ref|XP_002874333.1| hypothetical protein ARALYDRAFT_910771 [Arab...    77   1e-12
pir||T01773 syntaxin homolog A_IG002P16.16 - Arabidopsis thalian...    76   3e-12
ref|NP_198050.1| syntaxin-41 [Arabidopsis thaliana] gi|79328799|...    76   3e-12
ref|XP_002330184.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>ref|XP_003556534.1| PREDICTED: syntaxin-43-like [Glycine max]
          Length = 326

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/69 (60%), Positives = 45/69 (65%)
 Frame = -3

Query: 210 MATRNRTILFRKYRDALKSVXXXXXXXXXXXXXXXXXXXVIELSTASLLNPKRSYTPLST 31
           MATRNRT+LFRK+RDALKSV                   VIEL+T S LNP RSY PLST
Sbjct: 1   MATRNRTLLFRKHRDALKSVRVPSISSPPFTASGAGGGPVIELATTSFLNPNRSYAPLST 60

Query: 30  EDPGTSSRG 4
           EDPG SSRG
Sbjct: 61  EDPGNSSRG 69


>ref|XP_002874333.1| hypothetical protein ARALYDRAFT_910771 [Arabidopsis lyrata subsp.
           lyrata] gi|297320170|gb|EFH50592.1| hypothetical protein
           ARALYDRAFT_910771 [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/70 (57%), Positives = 48/70 (68%)
 Frame = -3

Query: 210 MATRNRTILFRKYRDALKSVXXXXXXXXXXXXXXXXXXXVIELSTASLLNPKRSYTPLST 31
           MATRNRT+LFRKYR++L+SV                   VIE++T SLLNP RSY P+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMATTSLLNPNRSYAPVST 60

Query: 30  EDPGTSSRGA 1
           EDPGTSS+GA
Sbjct: 61  EDPGTSSKGA 70


>pir||T01773 syntaxin homolog A_IG002P16.16 - Arabidopsis thaliana
           gi|2191179|gb|AAB61065.1| contains similarity to
           syntaxin [Arabidopsis thaliana]
          Length = 307

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = -3

Query: 210 MATRNRTILFRKYRDALKSVXXXXXXXXXXXXXXXXXXXVIELSTASLLNPKRSYTPLST 31
           MATRNRT+LFRKYR++L+SV                   VIE+++ SLLNP RSY P+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60

Query: 30  EDPGTSSRGA 1
           EDPGTSS+GA
Sbjct: 61  EDPGTSSKGA 70


>ref|NP_198050.1| syntaxin-41 [Arabidopsis thaliana] gi|79328799|ref|NP_001031950.1|
           syntaxin-41 [Arabidopsis thaliana]
           gi|28380151|sp|O65359.1|SYP41_ARATH RecName:
           Full=Syntaxin-41; Short=AtSYP41; Short=AtTLG2a
           gi|3172538|gb|AAC27707.1| syntaxin of plants 41
           [Arabidopsis thaliana] gi|332006253|gb|AED93636.1|
           syntaxin-41 [Arabidopsis thaliana]
           gi|332006254|gb|AED93637.1| syntaxin-41 [Arabidopsis
           thaliana]
          Length = 322

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = -3

Query: 210 MATRNRTILFRKYRDALKSVXXXXXXXXXXXXXXXXXXXVIELSTASLLNPKRSYTPLST 31
           MATRNRT+LFRKYR++L+SV                   VIE+++ SLLNP RSY P+ST
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRSYAPIST 60

Query: 30  EDPGTSSRGA 1
           EDPGTSS+GA
Sbjct: 61  EDPGTSSKGA 70


>ref|XP_002330184.1| predicted protein [Populus trichocarpa] gi|222871640|gb|EEF08771.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 41/71 (57%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = -3

Query: 210 MATRNRTILFRKYRDALKSVXXXXXXXXXXXXXXXXXXXV-IELSTASLLNPKRSYTPLS 34
           MATRNRT++FRKYRDALKSV                     IEL++ SLLNP R YTPLS
Sbjct: 1   MATRNRTLIFRKYRDALKSVRVPSSLSPSTSSSGGGGGGPVIELASTSLLNPNRKYTPLS 60

Query: 33  TEDPGTSSRGA 1
           TEDPG SS+GA
Sbjct: 61  TEDPGNSSKGA 71


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