BLASTX nr result

ID: Cephaelis21_contig00017474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017474
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   293   7e-77
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...   277   5e-72
ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   270   5e-70
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   267   4e-69
ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arab...   266   1e-68

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
            gi|147853333|emb|CAN82327.1| hypothetical protein
            VITISV_041807 [Vitis vinifera]
            gi|297740788|emb|CBI30970.3| unnamed protein product
            [Vitis vinifera]
          Length = 321

 Score =  293 bits (750), Expect = 7e-77
 Identities = 160/303 (52%), Positives = 199/303 (65%), Gaps = 2/303 (0%)
 Frame = -1

Query: 1161 WIELPRDITANILQRLGAVEILESAQKVCTTWRSVCKDPAMWRKIDMSLYVDDNDVLPFD 982
            W ELPRD+T+ IL +L AVEIL SAQ VC+ WR +C++P MWR IDM    D  D L +D
Sbjct: 20   WQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLCD-LGYD 78

Query: 981  MEIMCQHAVDRSQGQLVELKIARFGTDYLLDYVAQRSAQLKCLSLAFCDGVSGEGLTEAI 802
            +E M +HAVDRS GQL+ + I  F TD LL+Y+  RS+ ++ L L  C G+S +GL+E I
Sbjct: 79   LEEMARHAVDRSGGQLLSICIDDFATDNLLNYIIDRSSHIRHLRLVSCYGISDDGLSEGI 138

Query: 801  TRLPLLEELHLFVIGVPSESIEIIGRSCPMLKSFTLNKRRFKVSEIECDKEALAIAKTML 622
             RLPLL E+ L       E +E IG+ CP LKSF LN + F+   IECD+EALAIA+ M 
Sbjct: 139  KRLPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALAIAQNMP 198

Query: 621  ELRHLRFFGNKMTNEGLQAILDSCTHLESLDLRQCFDVNLVGELGKRCSQQLKYLRRPED 442
             L+ L+ FGNK+TN GL AILD C HLESLDLRQCF+VNL G L KRC++Q+K LR P D
Sbjct: 199  GLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRCAEQIKILRYPND 258

Query: 441  STVDYEYDTEVEID-SFN-GYPSGFSDLDLISXXXXXXXXXXXFTRWDVDSDYEDFFGHL 268
            ST DYE+D E+  D SF+  YPSG SDLDL+S                  SDY+ F  H 
Sbjct: 259  STDDYEFDAEIHDDASFDEEYPSGISDLDLLSDGDYYDFSDGSDFSEYDPSDYDPFEQHH 318

Query: 267  LMD 259
              D
Sbjct: 319  FYD 321


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297320679|gb|EFH51101.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score =  277 bits (708), Expect = 5e-72
 Identities = 143/270 (52%), Positives = 194/270 (71%)
 Frame = -1

Query: 1161 WIELPRDITANILQRLGAVEILESAQKVCTTWRSVCKDPAMWRKIDMSLYVDDNDVLPFD 982
            W ELP ++T+ IL RLGA+EILE+AQKVC +WR VCKDP+MWRKIDM    D  D + F+
Sbjct: 18   WTELPPELTSLILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLED-MEFN 76

Query: 981  MEIMCQHAVDRSQGQLVELKIARFGTDYLLDYVAQRSAQLKCLSLAFCDGVSGEGLTEAI 802
            ++IMC+HAVDRSQG LVE+ I  FGTD LL+Y+A RS+ L+ L L  C  ++ +GL EA+
Sbjct: 77   LDIMCRHAVDRSQGGLVEIDIWYFGTDGLLNYIADRSSNLRSLRLTRCSQITDDGLVEAV 136

Query: 801  TRLPLLEELHLFVIGVPSESIEIIGRSCPMLKSFTLNKRRFKVSEIECDKEALAIAKTML 622
             +LPLLE+L L    +   S++++G+SCP +K   L     K    E D +ALAIA+TM 
Sbjct: 137  LKLPLLEDLELSYCSLSGVSLKVLGQSCPNMKILKLKSYPQK----ENDDDALAIAETMP 192

Query: 621  ELRHLRFFGNKMTNEGLQAILDSCTHLESLDLRQCFDVNLVGELGKRCSQQLKYLRRPED 442
            +LRHL+ FGN +++ GL AILDSC +LE LDLR+CF+VNL+G+L KRCS+++K +R P D
Sbjct: 193  KLRHLQLFGNGLSDTGLNAILDSCLNLEHLDLRRCFNVNLIGDLQKRCSERVKVVRHPND 252

Query: 441  STVDYEYDTEVEIDSFNGYPSGFSDLDLIS 352
            ST D +  +     S + YP GFSD+DL+S
Sbjct: 253  STHDIDIGS-----SEDEYPYGFSDIDLMS 277


>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
            gi|449490588|ref|XP_004158648.1| PREDICTED: F-box protein
            SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  270 bits (691), Expect = 5e-70
 Identities = 143/301 (47%), Positives = 193/301 (64%), Gaps = 5/301 (1%)
 Frame = -1

Query: 1161 WIELPRDITANILQRLGAVEILESAQKVCTTWRSVCKDPAMWRKIDMSLYVDDNDVLPFD 982
            W+ELP D+T+ ILQ+LG VEIL  AQ VC++WR +C+DP MWR IDM    D  D + ++
Sbjct: 17   WLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWD-MDYN 75

Query: 981  MEIMCQHAVDRSQGQLVELKIARFGTDYLLDYVAQRSAQLKCLSLAFCDGVSGEGLTEAI 802
            +E +C+ AV RS GQL+   I  FGTD LL Y+ Q   QL  L L +C+ +S EGL EA+
Sbjct: 76   LEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISDEGLVEAV 135

Query: 801  TRLPLLEELHLFVIGVPSESIEIIGRSCPMLKSFTLNKRRFKVSEIECDKEALAIAKTML 622
            ++LPLLE+L L       E++E +G++CP LKS  LN++ ++   +ECDK ALAIA+ M 
Sbjct: 136  SKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYR--RVECDKGALAIAENMP 193

Query: 621  ELRHLRFFGNKMTNEGLQAILDSCTHLESLDLRQCFDVNLVGELGKRCSQQLKYLRRPED 442
             LRHL  FGN +TN+GL+AILD C+ LESLDLR CF++NL G+LG +CS+++K LR P D
Sbjct: 194  NLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDLRLPHD 253

Query: 441  STVDYEYDTEV-----EIDSFNGYPSGFSDLDLISXXXXXXXXXXXFTRWDVDSDYEDFF 277
             T D E+ TE+       D    YP G SD DL++                 D DY +F 
Sbjct: 254  PTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLTD----------------DDDYYEFS 297

Query: 276  G 274
            G
Sbjct: 298  G 298


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  267 bits (683), Expect = 4e-69
 Identities = 136/299 (45%), Positives = 187/299 (62%), Gaps = 2/299 (0%)
 Frame = -1

Query: 1161 WIELPRDITANILQRLGAVEILESAQKVCTTWRSVCKDPAMWRKIDMSLYVDDNDVLPFD 982
            W++LPRD+   I Q+LGA EIL  AQ VC+ WR++ K+P +WR IDM    D    L F 
Sbjct: 14   WLDLPRDVLCTIFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDMRNLGDIG--LDFH 71

Query: 981  MEIMCQHAVDRSQGQLVELKIARFGTDYLLDYVAQRSAQLKCLSLAFCDGVSGEGLTEAI 802
            +  MC  A+D S G L+ + +  FGTD LL ++   ++ L+ L LA C  +S EGL E  
Sbjct: 72   LLAMCHRAIDYSSGHLLHINVEYFGTDDLLHHITHSTSNLRSLRLACCYQISDEGLCEIA 131

Query: 801  TRLPLLEELHLFVIGVPSESIEIIGRSCPMLKSFTLNKRRFKVSEIECDKEALAIAKTML 622
             +LP LEEL + +  +  + +E IG+ CP LK+   N   ++   IECD+EA AIA+TM 
Sbjct: 132  EKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYRRPHIECDEEAFAIAETMP 191

Query: 621  ELRHLRFFGNKMTNEGLQAILDSCTHLESLDLRQCFDVNLVGELGKRCSQQLKYLRRPED 442
             L HL+ FGNK+TNEGL AILD C  LESLDLRQCF+VNL G LGKRC++Q+K LR P D
Sbjct: 192  GLHHLQLFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCD 251

Query: 441  STVDYEYDTEVEIDSFN-GYPSGFSDLDLISXXXXXXXXXXXFTRW-DVDSDYEDFFGH 271
             T DY ++ E++  S +  YPSG SD+D +S            + + + D D+ D++ H
Sbjct: 252  PTDDYPFEAEIDYGSLDEDYPSGISDIDFLSDDDYDYYEFSGGSDFSEYDDDHPDYYDH 310


>ref|XP_002863254.1| hypothetical protein ARALYDRAFT_332995 [Arabidopsis lyrata subsp.
            lyrata] gi|297309088|gb|EFH39513.1| hypothetical protein
            ARALYDRAFT_332995 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  266 bits (679), Expect = 1e-68
 Identities = 133/272 (48%), Positives = 189/272 (69%), Gaps = 5/272 (1%)
 Frame = -1

Query: 1161 WIELPRDITANILQRLGAVEILESAQKVCTTWRSVCKDPAMWRKIDMSLYVDDNDVLPFD 982
            W ELP ++T +IL RLGA++ILE+AQKVCT+WR V  DP MWRKIDM  Y+ D   + +D
Sbjct: 18   WAELPSELTFSILNRLGAIDILENAQKVCTSWRRVSLDPLMWRKIDMH-YLGDMGSMIYD 76

Query: 981  MEIMCQHAVDRSQGQLVELKIARFGTDYLLDYVAQRSAQLKCLSLAFCDGVSGEGLTEAI 802
             E MC+HAVDRSQG LVE+ I  FGTD LL+Y+A RS+ L+ L LA C+ ++ EG+TEA+
Sbjct: 77   FESMCRHAVDRSQGGLVEIDIWHFGTDDLLNYIADRSSNLRSLRLAMCNQITDEGVTEAV 136

Query: 801  TRLPLLEELHLFVIGVPSESIEIIGRSCPMLKSFTLNKRRFKVSEIEC-----DKEALAI 637
             +LPLLE+L +       ES+ ++G+SCP LK+  LN+       I+C     +  A+ I
Sbjct: 137  VKLPLLEDLDVSFCAFLGESLRVVGQSCPNLKTLKLNRS----PGIDCFLFRPNINAIVI 192

Query: 636  AKTMLELRHLRFFGNKMTNEGLQAILDSCTHLESLDLRQCFDVNLVGELGKRCSQQLKYL 457
            A++M  LRH++ FGN++ N GL AILD C H+E LDLR+CF++NLV ++ KRCS++++ L
Sbjct: 193  AESMPNLRHIQLFGNEINNTGLNAILDGCPHVEHLDLRKCFNINLVEDIEKRCSERIRVL 252

Query: 456  RRPEDSTVDYEYDTEVEIDSFNGYPSGFSDLD 361
            RRP DST D+ +D    ++ ++   S  +D D
Sbjct: 253  RRPYDSTADFLFDNIWFLECYSDSDSDDADRD 284


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