BLASTX nr result

ID: Cephaelis21_contig00017397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017397
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM64536.1| Arp2/3 complex p35 subunit [Nicotiana tabacum]         160   1e-60
ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex...   141   7e-56
ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [M...   142   3e-54
ref|XP_002532704.1| ARP2/3 complex 34 kDa subunit, putative [Ric...   135   5e-54
ref|XP_004134509.1| PREDICTED: actin-related protein 2/3 complex...   135   1e-53

>gb|ADM64536.1| Arp2/3 complex p35 subunit [Nicotiana tabacum]
          Length = 328

 Score =  160 bits (405), Expect(2) = 1e-60
 Identities = 79/112 (70%), Positives = 88/112 (78%)
 Frame = -1

Query: 594 MILLQSPSKYLLQILTTRLQNLEKGVELDCHWIEFGDVRYHIQASMKNXXXXXXXXXXXX 415
           MILLQSPS+YLLQIL+ R+QNLEKGVELDC W+EF D+RYHIQAS+KN            
Sbjct: 1   MILLQSPSRYLLQILSNRVQNLEKGVELDCQWVEFDDIRYHIQASVKNPNVLLLSVSLPI 60

Query: 414 XXXXXXSFGGLPPGAIEAIKSAYGVVAQILDPPRDGFSLTLKLNFSKLPPDE 259
                  FGGLP GA+EAIK+AYGVVAQILDPPRDGF+LTLKLN SKLPPDE
Sbjct: 61  PPPETVLFGGLPLGALEAIKAAYGVVAQILDPPRDGFNLTLKLNLSKLPPDE 112



 Score = 99.8 bits (247), Expect(2) = 1e-60
 Identities = 49/67 (73%), Positives = 57/67 (85%)
 Frame = -3

Query: 202 KHLALLKISSVRELVLGAPLRVFLQHLGSRTVASDIDKVVALVHRPMESFFLIPQMEKVT 23
           KH  L KI+SVRE+V+GAPLR  L+HL SRTV SD+ K VALVHRP ESFFL+PQ++KVT
Sbjct: 115 KHALLTKIASVREVVMGAPLRAVLKHLVSRTVPSDLGKPVALVHRPNESFFLVPQVDKVT 174

Query: 22  VIFPMRF 2
           VIFPMRF
Sbjct: 175 VIFPMRF 181


>ref|XP_002284770.1| PREDICTED: actin-related protein 2/3 complex subunit 2 isoform 1
           [Vitis vinifera] gi|297737660|emb|CBI26861.3| unnamed
           protein product [Vitis vinifera]
          Length = 328

 Score =  141 bits (355), Expect(2) = 7e-56
 Identities = 71/112 (63%), Positives = 81/112 (72%)
 Frame = -1

Query: 594 MILLQSPSKYLLQILTTRLQNLEKGVELDCHWIEFGDVRYHIQASMKNXXXXXXXXXXXX 415
           MILLQSPS++LLQ L  R+QNLEKGVELD  W+EF DVRYH+Q SMK             
Sbjct: 1   MILLQSPSRFLLQTLLNRVQNLEKGVELDYQWVEFDDVRYHVQVSMKYPQFLLLSVSLPT 60

Query: 414 XXXXXXSFGGLPPGAIEAIKSAYGVVAQILDPPRDGFSLTLKLNFSKLPPDE 259
                   GGLP GAIEAIK++YGV+ QILDPP+DGF+LTLKLN SKLPPDE
Sbjct: 61  PAQEAVFSGGLPFGAIEAIKASYGVLVQILDPPKDGFNLTLKLNLSKLPPDE 112



 Score =  102 bits (255), Expect(2) = 7e-56
 Identities = 50/67 (74%), Positives = 58/67 (86%)
 Frame = -3

Query: 202 KHLALLKISSVRELVLGAPLRVFLQHLGSRTVASDIDKVVALVHRPMESFFLIPQMEKVT 23
           KH  L+KI+SVRE+VLGAPLRV L+HL SRTVA DI++  ALVHRP ESFFL+PQ EKVT
Sbjct: 115 KHALLVKIASVREVVLGAPLRVVLKHLASRTVAPDINRPFALVHRPKESFFLVPQAEKVT 174

Query: 22  VIFPMRF 2
           V+FPMRF
Sbjct: 175 VVFPMRF 181


>ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [Medicago truncatula]
           gi|355522987|gb|AET03441.1| Actin-related protein 2/3
           complex subunit [Medicago truncatula]
          Length = 375

 Score =  142 bits (359), Expect(2) = 3e-54
 Identities = 74/136 (54%), Positives = 91/136 (66%)
 Frame = -1

Query: 666 HTRLGHRNSEQQNWR*QQKERNKDMILLQSPSKYLLQILTTRLQNLEKGVELDCHWIEFG 487
           H +L  RN+ ++  R ++K     MILLQS S++LLQ L  RLQN+EKGVELD HW+EF 
Sbjct: 28  HQKLLKRNTRREEKRRKRKGSGSSMILLQSHSRFLLQTLLNRLQNIEKGVELDHHWVEFD 87

Query: 486 DVRYHIQASMKNXXXXXXXXXXXXXXXXXXSFGGLPPGAIEAIKSAYGVVAQILDPPRDG 307
           DVRYHIQ SMKN                     GLP GAIEAIK+AYG + QILDPPRDG
Sbjct: 88  DVRYHIQVSMKNPNIFLLSVSLPTPSSETIFVCGLPFGAIEAIKAAYGSLVQILDPPRDG 147

Query: 306 FSLTLKLNFSKLPPDE 259
           F+LTLK+N SK+P ++
Sbjct: 148 FNLTLKINLSKVPANQ 163



 Score = 95.9 bits (237), Expect(2) = 3e-54
 Identities = 45/68 (66%), Positives = 57/68 (83%)
 Frame = -3

Query: 205 QKHLALLKISSVRELVLGAPLRVFLQHLGSRTVASDIDKVVALVHRPMESFFLIPQMEKV 26
           Q+   L+K++SVRE+VLGAPLRV L+HL SR VA D+D +VALVHRP ESFF+ PQ +KV
Sbjct: 165 QRQALLVKVASVREVVLGAPLRVILKHLASRNVAPDMDPLVALVHRPKESFFVFPQADKV 224

Query: 25  TVIFPMRF 2
           TV++PMRF
Sbjct: 225 TVMYPMRF 232


>ref|XP_002532704.1| ARP2/3 complex 34 kDa subunit, putative [Ricinus communis]
           gi|223527550|gb|EEF29671.1| ARP2/3 complex 34 kDa
           subunit, putative [Ricinus communis]
          Length = 257

 Score =  135 bits (340), Expect(2) = 5e-54
 Identities = 70/112 (62%), Positives = 78/112 (69%)
 Frame = -1

Query: 594 MILLQSPSKYLLQILTTRLQNLEKGVELDCHWIEFGDVRYHIQASMKNXXXXXXXXXXXX 415
           MILLQS S++LLQ L  R++NL+K VELD  W+EF DVRYHIQ SMKN            
Sbjct: 1   MILLQSHSRFLLQTLLNRVKNLDKAVELDYQWVEFNDVRYHIQVSMKNPNAVLLSVSLPT 60

Query: 414 XXXXXXSFGGLPPGAIEAIKSAYGVVAQILDPPRDGFSLTLKLNFSKLPPDE 259
                   GGLP GAIEAIK+AYG V QILDPPRDGF+LTLKLN SKLP DE
Sbjct: 61  PPPETVFLGGLPFGAIEAIKAAYGSVVQILDPPRDGFNLTLKLNLSKLPTDE 112



 Score =  102 bits (254), Expect(2) = 5e-54
 Identities = 49/67 (73%), Positives = 59/67 (88%)
 Frame = -3

Query: 202 KHLALLKISSVRELVLGAPLRVFLQHLGSRTVASDIDKVVALVHRPMESFFLIPQMEKVT 23
           +   L+KI+SVRE+VLGAPLRV L+HL SRTVA DID+++ALVHRP ESFFL+PQ EKVT
Sbjct: 115 RQAVLVKIASVREVVLGAPLRVVLKHLASRTVAPDIDRLLALVHRPNESFFLVPQAEKVT 174

Query: 22  VIFPMRF 2
           V+FPMRF
Sbjct: 175 VVFPMRF 181


>ref|XP_004134509.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Cucumis sativus]
          Length = 320

 Score =  135 bits (339), Expect(2) = 1e-53
 Identities = 68/112 (60%), Positives = 79/112 (70%)
 Frame = -1

Query: 594 MILLQSPSKYLLQILTTRLQNLEKGVELDCHWIEFGDVRYHIQASMKNXXXXXXXXXXXX 415
           MILLQS S++LLQ L  R+ NLEK VE+D +W+EF DVRYH+Q SMKN            
Sbjct: 1   MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNPHLFLLSVSLPI 60

Query: 414 XXXXXXSFGGLPPGAIEAIKSAYGVVAQILDPPRDGFSLTLKLNFSKLPPDE 259
                   GGLP GAIEAIK+AYG++ QILDPPRDGF+LTLKLN SKLP DE
Sbjct: 61  PSADTVFCGGLPSGAIEAIKAAYGILVQILDPPRDGFNLTLKLNLSKLPLDE 112



 Score =  101 bits (252), Expect(2) = 1e-53
 Identities = 47/67 (70%), Positives = 59/67 (88%)
 Frame = -3

Query: 202 KHLALLKISSVRELVLGAPLRVFLQHLGSRTVASDIDKVVALVHRPMESFFLIPQMEKVT 23
           +H  L+K++S+RE+VLGAPLR  L+ LGSR VASD++K+VALVHRP ESFFL+PQ EKVT
Sbjct: 115 RHTILVKVASIREVVLGAPLRGILKQLGSRVVASDVNKLVALVHRPKESFFLVPQAEKVT 174

Query: 22  VIFPMRF 2
           V+FPMRF
Sbjct: 175 VVFPMRF 181


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