BLASTX nr result

ID: Cephaelis21_contig00017347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017347
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26626.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   136   2e-30
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   136   2e-30
sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot...   135   3e-30
ref|XP_002522953.1| nuclear acid binding protein, putative [Rici...   127   7e-28

>emb|CBI26626.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/72 (84%), Positives = 64/72 (88%), Gaps = 2/72 (2%)
 Frame = -2

Query: 437 LNGSQLGGQSIRLSWGRSPSNKQS--DQPQWNGGYYGYSQGYEAYGYAPPAQDPNMYYGG 264
           LNG+QLG QSIRLSWGRSPSNKQ+  DQ QWNGGYYGY+QGYEAYGYAPP QDPNMYYG 
Sbjct: 107 LNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYAPPPQDPNMYYGA 166

Query: 263 YPGYSNYQQAQQ 228
           YPGY NYQQ QQ
Sbjct: 167 YPGYGNYQQPQQ 178


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/72 (84%), Positives = 64/72 (88%), Gaps = 2/72 (2%)
 Frame = -2

Query: 437 LNGSQLGGQSIRLSWGRSPSNKQS--DQPQWNGGYYGYSQGYEAYGYAPPAQDPNMYYGG 264
           LNG+QLG QSIRLSWGRSPSNKQ+  DQ QWNGGYYGY+QGYEAYGYAPP QDPNMYYG 
Sbjct: 346 LNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYAPPPQDPNMYYGA 405

Query: 263 YPGYSNYQQAQQ 228
           YPGY NYQQ QQ
Sbjct: 406 YPGYGNYQQPQQ 417


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/72 (84%), Positives = 64/72 (88%), Gaps = 2/72 (2%)
 Frame = -2

Query: 437 LNGSQLGGQSIRLSWGRSPSNKQS--DQPQWNGGYYGYSQGYEAYGYAPPAQDPNMYYGG 264
           LNG+QLG QSIRLSWGRSPSNKQ+  DQ QWNGGYYGY+QGYEAYGYAPP QDPNMYYG 
Sbjct: 325 LNGTQLGAQSIRLSWGRSPSNKQAQPDQAQWNGGYYGYAQGYEAYGYAPPPQDPNMYYGA 384

Query: 263 YPGYSNYQQAQQ 228
           YPGY NYQQ QQ
Sbjct: 385 YPGYGNYQQPQQ 396


>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
           Short=Poly(A)-binding protein RBP45; AltName:
           Full=RNA-binding protein 45; Short=NplRBP45
           gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
           [Nicotiana plumbaginifolia]
          Length = 409

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/74 (82%), Positives = 65/74 (87%), Gaps = 3/74 (4%)
 Frame = -2

Query: 440 SLNGSQLGGQSIRLSWGRSPSNKQSDQPQWNGG---YYGYSQGYEAYGYAPPAQDPNMYY 270
           SLNG+QLGGQSIRLSWGRSPS+KQ+DQ QW G    YYGY QGYEAYGYAPPAQDPNMYY
Sbjct: 336 SLNGTQLGGQSIRLSWGRSPSSKQTDQTQWGGSGGAYYGYGQGYEAYGYAPPAQDPNMYY 395

Query: 269 GGYPGYSNYQQAQQ 228
           G YPGY+NYQQ QQ
Sbjct: 396 GNYPGYANYQQPQQ 409


>ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223537765|gb|EEF39383.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 404

 Score =  127 bits (320), Expect = 7e-28
 Identities = 58/69 (84%), Positives = 62/69 (89%), Gaps = 2/69 (2%)
 Frame = -2

Query: 437 LNGSQLGGQSIRLSWGRSPSNKQS--DQPQWNGGYYGYSQGYEAYGYAPPAQDPNMYYGG 264
           LNG+QL GQSIRLSWGRSPSNKQ+  DQ QWNGGYYGY+QGY+AYGYAPP QDPNMYY G
Sbjct: 321 LNGTQLAGQSIRLSWGRSPSNKQAQPDQSQWNGGYYGYAQGYDAYGYAPP-QDPNMYYSG 379

Query: 263 YPGYSNYQQ 237
           YPGY NYQQ
Sbjct: 380 YPGYGNYQQ 388


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