BLASTX nr result

ID: Cephaelis21_contig00017345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017345
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT...   243   3e-62
emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]   243   5e-62
gb|AFK46964.1| unknown [Lotus japonicus]                              234   1e-59
ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycin...   233   5e-59

>ref|XP_002281441.1| PREDICTED: protein LHCP TRANSLOCATION DEFECT [Vitis vinifera]
           gi|297735982|emb|CBI23956.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  243 bits (620), Expect = 3e-62
 Identities = 130/184 (70%), Positives = 145/184 (78%)
 Frame = +3

Query: 6   MASIPCILQQTFTPSRPVNSYPSATSLCKLTSQFVGSTSTTGTARLGWCRRSRPTRIGPC 185
           MASIPC     FT S+P  S PS   +   TSQ +G        +L W   S PTR+GP 
Sbjct: 1   MASIPCTTHLLFT-SKPQIS-PSNPPI--FTSQLLGIPR-----KLSW---STPTRLGPS 48

Query: 186 SGSRTTCWFRFGKNGVDSEGAGIYGSQSRDDFDKEDVEQYFNYMGMLAVEGTYDKMYELL 365
           +GSR TCWFRFG  GVD+EGAGIYGSQ+RDDFD++DVEQYFNYMGMLAVEGTYDKM  LL
Sbjct: 49  NGSRATCWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALL 108

Query: 366 SQNIHPVDILLMMAASEGDKPKIEELLRAGADYTVKDSEGRTALDKAANDEIKDFILGFS 545
           SQNIHPVDILLMMAASEGD+PKIEELLRAGA YTVKD++GRTAL++AANDEIKD IL FS
Sbjct: 109 SQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFS 168

Query: 546 VQKA 557
            QKA
Sbjct: 169 TQKA 172


>emb|CAN65357.1| hypothetical protein VITISV_041274 [Vitis vinifera]
          Length = 172

 Score =  243 bits (619), Expect = 5e-62
 Identities = 130/184 (70%), Positives = 145/184 (78%)
 Frame = +3

Query: 6   MASIPCILQQTFTPSRPVNSYPSATSLCKLTSQFVGSTSTTGTARLGWCRRSRPTRIGPC 185
           MASIPC     FT S+P  S PS   +   TSQ +G        +L W   S PTR+GP 
Sbjct: 1   MASIPCTTHLLFT-SKPQIS-PSNPPI--FTSQXLGIPR-----KLSW---STPTRLGPS 48

Query: 186 SGSRTTCWFRFGKNGVDSEGAGIYGSQSRDDFDKEDVEQYFNYMGMLAVEGTYDKMYELL 365
           +GSR TCWFRFG  GVD+EGAGIYGSQ+RDDFD++DVEQYFNYMGMLAVEGTYDKM  LL
Sbjct: 49  NGSRATCWFRFGNRGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALL 108

Query: 366 SQNIHPVDILLMMAASEGDKPKIEELLRAGADYTVKDSEGRTALDKAANDEIKDFILGFS 545
           SQNIHPVDILLMMAASEGD+PKIEELLRAGA YTVKD++GRTAL++AANDEIKD IL FS
Sbjct: 109 SQNIHPVDILLMMAASEGDQPKIEELLRAGASYTVKDADGRTALERAANDEIKDLILNFS 168

Query: 546 VQKA 557
            QKA
Sbjct: 169 TQKA 172


>gb|AFK46964.1| unknown [Lotus japonicus]
          Length = 175

 Score =  234 bits (598), Expect = 1e-59
 Identities = 123/183 (67%), Positives = 139/183 (75%)
 Frame = +3

Query: 9   ASIPCILQQTFTPSRPVNSYPSATSLCKLTSQFVGSTSTTGTARLGWCRRSRPTRIGPCS 188
           +SI CI  Q  T    +NS PS  S   L S F+G     G  RL        + IGP +
Sbjct: 3   SSIACITHQPITSR--LNSLPSPVSSLNLASGFLGIRRRVGCLRL-------TSSIGPSN 53

Query: 189 GSRTTCWFRFGKNGVDSEGAGIYGSQSRDDFDKEDVEQYFNYMGMLAVEGTYDKMYELLS 368
           GS+ TCWFRFGKNGVD+EGAGIYGSQSRDDFD++DVEQYFNYMGMLAVEGTYDKM  LLS
Sbjct: 54  GSKATCWFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLS 113

Query: 369 QNIHPVDILLMMAASEGDKPKIEELLRAGADYTVKDSEGRTALDKAANDEIKDFILGFSV 548
           Q IHPVDILL++AASEGD PKIEELLRAGA Y V+D +GRTALD+ ANDE+KDFIL FSV
Sbjct: 114 QKIHPVDILLLLAASEGDMPKIEELLRAGAKYDVRDGDGRTALDR-ANDEVKDFILNFSV 172

Query: 549 QKA 557
           Q+A
Sbjct: 173 QRA 175


>ref|XP_002319824.1| predicted protein [Populus trichocarpa] gi|222858200|gb|EEE95747.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  234 bits (597), Expect = 2e-59
 Identities = 127/184 (69%), Positives = 143/184 (77%)
 Frame = +3

Query: 6   MASIPCILQQTFTPSRPVNSYPSATSLCKLTSQFVGSTSTTGTARLGWCRRSRPTRIGPC 185
           MASI      T   S P +S P    L KL SQF+G  S      +GW R   P RIGP 
Sbjct: 1   MASILSTTHLTLA-SNPQSSQPF---LPKLNSQFLGLQSN-----VGWLR---PCRIGPS 48

Query: 186 SGSRTTCWFRFGKNGVDSEGAGIYGSQSRDDFDKEDVEQYFNYMGMLAVEGTYDKMYELL 365
           +GSR  CWF+FGKNGVD+EGAGIYGSQ+RDDFD++DVEQYFNYMGMLAVEGTYDKM  LL
Sbjct: 49  NGSRAKCWFKFGKNGVDAEGAGIYGSQTRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALL 108

Query: 366 SQNIHPVDILLMMAASEGDKPKIEELLRAGADYTVKDSEGRTALDKAANDEIKDFILGFS 545
           SQNIHPVDILLM+AASEGDKPKIEELLRAGA Y +KD++GRTALD+ AN+E KDFILG S
Sbjct: 109 SQNIHPVDILLMLAASEGDKPKIEELLRAGAGYDIKDADGRTALDR-ANEETKDFILGLS 167

Query: 546 VQKA 557
           V+KA
Sbjct: 168 VRKA 171


>ref|NP_001236074.1| uncharacterized protein LOC100500557 [Glycine max]
           gi|255630625|gb|ACU15672.1| unknown [Glycine max]
          Length = 181

 Score =  233 bits (593), Expect = 5e-59
 Identities = 125/189 (66%), Positives = 145/189 (76%), Gaps = 5/189 (2%)
 Frame = +3

Query: 6   MASIPCILQQ----TFTPSRPVNSYPSA-TSLCKLTSQFVGSTSTTGTARLGWCRRSRPT 170
           MASIPCI       T  P+   N++PS   S   L S+F+G+    G+  L         
Sbjct: 1   MASIPCITHHHHPITSNPNNN-NAFPSPHVSASNLASRFLGTRRRVGSHSL------TSR 53

Query: 171 RIGPCSGSRTTCWFRFGKNGVDSEGAGIYGSQSRDDFDKEDVEQYFNYMGMLAVEGTYDK 350
            IGP +GS++TCWFRFGKNGVD++GAGIYGSQ RDDFD++DVEQYFNYMGML VEGTYDK
Sbjct: 54  IIGPSNGSKSTCWFRFGKNGVDAQGAGIYGSQGRDDFDRDDVEQYFNYMGMLTVEGTYDK 113

Query: 351 MYELLSQNIHPVDILLMMAASEGDKPKIEELLRAGADYTVKDSEGRTALDKAANDEIKDF 530
           M  LLSQNIHPVDILL++AASEGDKPKIEELLRAGA Y VKD++GRTALD+AA DEIKDF
Sbjct: 114 MEALLSQNIHPVDILLLLAASEGDKPKIEELLRAGAKYDVKDADGRTALDRAA-DEIKDF 172

Query: 531 ILGFSVQKA 557
           IL FSVQ+A
Sbjct: 173 ILNFSVQRA 181


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