BLASTX nr result

ID: Cephaelis21_contig00017266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017266
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   352   4e-95
gb|ABK95213.1| unknown [Populus trichocarpa]                          350   3e-94
ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|2...   348   6e-94
ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus ...   343   2e-92
emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera]   342   4e-92

>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis
           vinifera] gi|297736812|emb|CBI26013.3| unnamed protein
           product [Vitis vinifera]
          Length = 307

 Score =  352 bits (904), Expect = 4e-95
 Identities = 169/216 (78%), Positives = 188/216 (87%)
 Frame = -1

Query: 648 SPSTQQQQQRFIESKPRLMTPNSRRTGAIAFKCGMTALWDKWGARVPITILSLDDNIVTQ 469
           S S   ++ R I  KP +M+PNS+RTGAIA KCGM+ALWDKWGARVPIT+L LDDNIV+Q
Sbjct: 35  SESLIDEEPRIIVPKPGVMSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQ 94

Query: 468 VKTPDKEGIIALQIGCGHKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSI 289
           VKT +KEG+ ALQ+GCG KK KHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGT+I
Sbjct: 95  VKTFEKEGLNALQVGCGQKKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTI 154

Query: 288 GVRHFLPGQFVDITGISRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVF 109
           GVRHF+PGQ+VD+TGI+RGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVF
Sbjct: 155 GVRHFVPGQYVDVTGITRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVF 214

Query: 108 XXXXXXXXXXXKQVTVKNIWVYKIDPARNLIWVKGQ 1
                      KQ TVKN+WVYKIDP RNL+WV+GQ
Sbjct: 215 KGKKMPGRMGGKQRTVKNVWVYKIDPTRNLMWVRGQ 250


>gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  350 bits (897), Expect = 3e-94
 Identities = 165/210 (78%), Positives = 182/210 (86%)
 Frame = -1

Query: 630 QQQRFIESKPRLMTPNSRRTGAIAFKCGMTALWDKWGARVPITILSLDDNIVTQVKTPDK 451
           QQ R IE+KP +MTPNS+RTG +A KCGMTALWDKWGAR+PIT+L +DDNIV+QVKT +K
Sbjct: 51  QQSRIIEAKPGVMTPNSKRTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEK 110

Query: 450 EGIIALQIGCGHKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSIGVRHFL 271
           EG  ALQ+GCG KKEKHLTKPEVGHFRAQGVP+KRKLREFPVTEDALLPVGT +GVRHF+
Sbjct: 111 EGFFALQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTYVGVRHFV 170

Query: 270 PGQFVDITGISRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXXX 91
           PGQFVD+ GI+ GKGFQGGMKR GFKG PASHGASLSHRSIGSTGQRDAPGKVF      
Sbjct: 171 PGQFVDVAGITMGKGFQGGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMP 230

Query: 90  XXXXXKQVTVKNIWVYKIDPARNLIWVKGQ 1
                 Q TVKN+WVYKIDPARNL+WVKGQ
Sbjct: 231 GRMGGVQRTVKNVWVYKIDPARNLMWVKGQ 260


>ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|222864508|gb|EEF01639.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  348 bits (894), Expect = 6e-94
 Identities = 166/211 (78%), Positives = 182/211 (86%)
 Frame = -1

Query: 633 QQQQRFIESKPRLMTPNSRRTGAIAFKCGMTALWDKWGARVPITILSLDDNIVTQVKTPD 454
           QQ  R IE+KP +MTPNS+RTG IA KCGMTALWDKWGAR+PIT+L +DDNIV+QVKT +
Sbjct: 55  QQPSRIIEAKPGVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVE 114

Query: 453 KEGIIALQIGCGHKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSIGVRHF 274
           KEG  ALQ+GCG KKEKHLTKPEVGHFRAQGVP+KRKLREFPVTE+ALLPVGT IGVRHF
Sbjct: 115 KEGFFALQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTENALLPVGTCIGVRHF 174

Query: 273 LPGQFVDITGISRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXX 94
           +PGQFVD+ GI+ GKGFQGGMKR GFKG PASHGASLSHRSIGSTGQRDAPGKVF     
Sbjct: 175 VPGQFVDVAGITMGKGFQGGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKM 234

Query: 93  XXXXXXKQVTVKNIWVYKIDPARNLIWVKGQ 1
                  Q TVKN+WVYKIDPARNL+WVKGQ
Sbjct: 235 PGRMGGVQRTVKNVWVYKIDPARNLMWVKGQ 265


>ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus communis]
           gi|223541641|gb|EEF43190.1| 50S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 311

 Score =  343 bits (880), Expect = 2e-92
 Identities = 163/211 (77%), Positives = 182/211 (86%)
 Frame = -1

Query: 633 QQQQRFIESKPRLMTPNSRRTGAIAFKCGMTALWDKWGARVPITILSLDDNIVTQVKTPD 454
           Q++ R +E+KP +MTP+S+RTG IA KCGMTALWDKWG RVPIT+L +DDNIVTQVKT +
Sbjct: 46  QEEARILEAKPGIMTPHSKRTGIIALKCGMTALWDKWGERVPITVLWVDDNIVTQVKTVE 105

Query: 453 KEGIIALQIGCGHKKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSIGVRHF 274
           KEGI ALQIG GHKK KHLTKPEVGHFRA  VPLKRKLREFPVTEDAL+PVGTS+GVRHF
Sbjct: 106 KEGIFALQIGYGHKKAKHLTKPEVGHFRAHNVPLKRKLREFPVTEDALIPVGTSLGVRHF 165

Query: 273 LPGQFVDITGISRGKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXX 94
           +PGQFVDITGI+RGKGFQGGMKR GFKGMPA+HGASLSHRS GSTGQRDAPGKVF     
Sbjct: 166 VPGQFVDITGITRGKGFQGGMKRHGFKGMPATHGASLSHRSGGSTGQRDAPGKVFKGKKM 225

Query: 93  XXXXXXKQVTVKNIWVYKIDPARNLIWVKGQ 1
                  Q TVKN+WVYKIDP RN++WV+GQ
Sbjct: 226 PGRMGGVQRTVKNVWVYKIDPTRNMMWVRGQ 256


>emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera]
          Length = 243

 Score =  342 bits (878), Expect = 4e-92
 Identities = 163/198 (82%), Positives = 178/198 (89%)
 Frame = -1

Query: 594 MTPNSRRTGAIAFKCGMTALWDKWGARVPITILSLDDNIVTQVKTPDKEGIIALQIGCGH 415
           M+PNS+RTGAIA KCGM+ALWDKWGARVPIT+L LDDNIV+QVKT +KEG  ALQ+GCG 
Sbjct: 1   MSPNSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGXNALQVGCGQ 60

Query: 414 KKEKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTSIGVRHFLPGQFVDITGISR 235
           KK KHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGT+IGVRHF+PGQ+VD+TGI+R
Sbjct: 61  KKAKHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQYVDVTGITR 120

Query: 234 GKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFXXXXXXXXXXXKQVTVKN 55
           GKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVF           KQ TVKN
Sbjct: 121 GKGFQGGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKN 180

Query: 54  IWVYKIDPARNLIWVKGQ 1
           +WVYKIDP RNL+WV+GQ
Sbjct: 181 VWVYKIDPTRNLMWVRGQ 198


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