BLASTX nr result

ID: Cephaelis21_contig00017220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017220
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|35550...    63   8e-08
ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|35550...    63   1e-07
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    60   9e-07
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...    58   3e-06
ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata sub...    58   3e-06

>ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|355503433|gb|AES84636.1|
           F-box protein [Medicago truncatula]
          Length = 383

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
 Frame = +3

Query: 150 KKETWTDI-SFPYKLSVISSTSGVLVSGHLHWIV--RGEISNEQSIVIFDEEINQFSELL 320
           K  +W ++ + PY LS    T G  V   LHW++  + ++   ++IV F+  +  F+E+ 
Sbjct: 179 KTNSWKELPTMPYTLSYARRTMGDFVENSLHWVMTRKLDLLQPRAIVAFNLTLEIFNEVP 238

Query: 321 MPEELISQYISSVHF--GLTILHGCLCICKLVNICGYVLNPDDNFNHVLLMREYSVKQSW 494
            PE  I + ++S  F  G+++L GCLC+         ++N       V +M+EY  + SW
Sbjct: 239 FPE--IGEDVNSESFQIGISVLEGCLCM---------IVNYQTAKIDVWVMKEYGCRDSW 287

Query: 495 TRLFNV-RGCFSL 530
            +LF +   CFSL
Sbjct: 288 CKLFTLAESCFSL 300


>ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|355503434|gb|AES84637.1|
           F-box protein [Medicago truncatula]
          Length = 380

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
 Frame = +3

Query: 150 KKETWTDI-SFPYKLSVISSTSGVLVSGHLHWIVRGEISNEQS--IVIFDEEINQFSELL 320
           K  +W D+ S PY LS    T GV V   LHWI+  ++   QS  IV F+     F+E+ 
Sbjct: 177 KMNSWKDLPSMPYALSY-PRTEGVFVENSLHWIMTRKLGQLQSRVIVAFNLTHEIFNEVP 235

Query: 321 MPEELISQYISSVHF--GLTILHGCLCICKLVNICGYVLNPDDNFNHVLLMREYSVKQSW 494
            PE  I + ++S  F  G+ +L GCLC+         ++N       V +M+EY  + SW
Sbjct: 236 FPE--IGEEVNSESFEIGVAVLEGCLCM---------IVNYQTVKIDVWVMKEYGCRDSW 284

Query: 495 TRLFNV-RGCFSL---*VFPYVYLQPCKMVL 575
             LF +   CF L    ++P  Y     MVL
Sbjct: 285 CELFTLAESCFILPLKTLWPLAYSSDGSMVL 315


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
 Frame = +3

Query: 150 KKETWTDIS-FPYKLSVISSTSGVLVSGHLHWIV-RGEISNEQSIVI-FDEEINQFSELL 320
           +K++W  I   PY +      +GV  +G LHW+V     SN  +IV+  D  +  + E+L
Sbjct: 186 RKQSWRRIGDMPYCVHY-PGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVL 244

Query: 321 MPEELISQYISSVHFGLTILHGCLCICKLVNICGYVLNPDDNFNHVLLMREYSVKQSWTR 500
            PE     +    +  L +L GCLC   L N  G  ++       V +M+EY VK+SWT+
Sbjct: 245 QPEYKDKNF----YIDLGVLRGCLCF--LANFLGERVD-------VWMMKEYGVKESWTK 291

Query: 501 LFNV 512
           LF+V
Sbjct: 292 LFSV 295


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
 Frame = +3

Query: 213 GVLVSGHLHWIV--RGEISNEQSIVIFDEEINQFSELLMPEELISQYISSVHFGLTILHG 386
           GVL    LHW++  R  +     IV FD  + +F  +  PE + +  +  +   + +L G
Sbjct: 212 GVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVD-IQMDIGVLDG 270

Query: 387 CLCICKLVNICGYVLNPDDNFNHVLLMREYSVKQSWTRLFNVRGCFSL*VF----PYVYL 554
           CLC+     +C Y    D ++  V +M+EY+V+ SWT++F V+   S+  F    P VY 
Sbjct: 271 CLCL-----MCNY----DQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSYMRPLVYS 321

Query: 555 QPCKMVL 575
           +  K VL
Sbjct: 322 KDKKKVL 328


>ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318497|gb|EFH48919.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
 Frame = +3

Query: 213 GVLVSGHLHWIV--RGEISNEQSIVIFDEEINQFSELLMPEELISQYISSVHFGLTILHG 386
           GVL    LHW++  R  +     IV FD  + +F  +  PE + +  +  +   +++L G
Sbjct: 213 GVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFGIVRFPETVANGNVD-IQMDISVLDG 271

Query: 387 CLCICKLVNICGYVLNPDDNFNHVLLMREYSVKQSWTRLFNVRGCFSL*VFPYV 548
           CLC+     +C Y    D  +  V +M+EY+V+ SWT++F V+   S+  F Y+
Sbjct: 272 CLCL-----MCNY----DQEYVDVWMMKEYNVRSSWTKVFTVQKPKSVKSFAYM 316


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