BLASTX nr result

ID: Cephaelis21_contig00017132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017132
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   162   7e-38
emb|CBI15328.3| unnamed protein product [Vitis vinifera]              162   7e-38
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...   160   4e-37
ref|XP_003630353.1| Pentatricopeptide repeat-containing protein ...   157   2e-36
gb|AFK45023.1| unknown [Medicago truncatula]                          157   2e-36

>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  162 bits (410), Expect = 7e-38
 Identities = 92/187 (49%), Positives = 117/187 (62%)
 Frame = +1

Query: 208 LFTGKYDFLLRPFLLSVRLISSQTDGEAVKSPFLEEETIGKALSCELLKDPDVESPSLSQ 387
           L + +  F+   F LS R  SSQ +  A      +   I ++LS ELLKDPD E   + Q
Sbjct: 40  LCSSQRHFVSPSFPLS-RRFSSQPNNSADD----DHSQIAQSLSSELLKDPDSEPVPIIQ 94

Query: 388 RLDLSFSHVPIMPSLVVNTLNIALDAGQLVLDFLKWVSSKPNINVADEFFSYFVDYFGRR 567
           RL LSFSH+   P L++ TLN + DAG+ VL F KW+SS P    +DE  S+FVDYFGRR
Sbjct: 95  RLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRR 154

Query: 568 KDFKATHDVHVDGIGKTRLK*FESLVDRLVRAGRPTQAVVLFDKMEKEYGMARNLDPLKF 747
           KDFKA H+V +DG      K  ES +DRLVRAGR TQ V  FD+ME +YG  R+ + L  
Sbjct: 155 KDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTM 214

Query: 748 IVSKLCD 768
           +VSKLC+
Sbjct: 215 VVSKLCE 221


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  162 bits (410), Expect = 7e-38
 Identities = 92/187 (49%), Positives = 117/187 (62%)
 Frame = +1

Query: 208 LFTGKYDFLLRPFLLSVRLISSQTDGEAVKSPFLEEETIGKALSCELLKDPDVESPSLSQ 387
           L + +  F+   F LS R  SSQ +  A      +   I ++LS ELLKDPD E   + Q
Sbjct: 56  LCSSQRHFVSPSFPLS-RRFSSQPNNSADD----DHSQIAQSLSSELLKDPDSEPVPIIQ 110

Query: 388 RLDLSFSHVPIMPSLVVNTLNIALDAGQLVLDFLKWVSSKPNINVADEFFSYFVDYFGRR 567
           RL LSFSH+   P L++ TLN + DAG+ VL F KW+SS P    +DE  S+FVDYFGRR
Sbjct: 111 RLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRR 170

Query: 568 KDFKATHDVHVDGIGKTRLK*FESLVDRLVRAGRPTQAVVLFDKMEKEYGMARNLDPLKF 747
           KDFKA H+V +DG      K  ES +DRLVRAGR TQ V  FD+ME +YG  R+ + L  
Sbjct: 171 KDFKAIHEVLMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTM 230

Query: 748 IVSKLCD 768
           +VSKLC+
Sbjct: 231 VVSKLCE 237


>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Glycine max]
          Length = 509

 Score =  160 bits (404), Expect = 4e-37
 Identities = 85/178 (47%), Positives = 114/178 (64%)
 Frame = +1

Query: 232 LLRPFLLSVRLISSQTDGEAVKSPFLEEETIGKALSCELLKDPDVESPSLSQRLDLSFSH 411
           L  P     R  SS+T          + + I  +LS ELLK+PD ++ S+SQRL+LSFSH
Sbjct: 46  LFTPSFFITRHFSSET----------QTDEIASSLSSELLKEPDSDALSVSQRLNLSFSH 95

Query: 412 VPIMPSLVVNTLNIALDAGQLVLDFLKWVSSKPNINVADEFFSYFVDYFGRRKDFKATHD 591
           +   P+L++ TLN++  AG+ VL F +W+SS P  +  D+  SYFVDYFGRRKDFKATHD
Sbjct: 96  ITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKATHD 155

Query: 592 VHVDGIGKTRLK*FESLVDRLVRAGRPTQAVVLFDKMEKEYGMARNLDPLKFIVSKLC 765
           V          K   S +DRLVRAGR +QAV  F++ME++YG+ R+ D LK +V KLC
Sbjct: 156 VLAAASPAAGPKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKRDRDSLKVVVEKLC 213


>ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524375|gb|AET04829.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  157 bits (398), Expect = 2e-36
 Identities = 87/177 (49%), Positives = 118/177 (66%), Gaps = 2/177 (1%)
 Frame = +1

Query: 241 PFLLSVRLISSQTDGEAVKSPFLEEETIGKALSCELLKDPDVESPSLSQRLDLSFSHVPI 420
           P L  +   SS++  E V +   E + I  A+S ELLK+PD +  S++QRL+LSFSH+  
Sbjct: 54  PSLFQIEHFSSESKPEPVSTT--EPDPIAIAISSELLKEPDSDPSSVTQRLNLSFSHITP 111

Query: 421 MPSLVVNTLNIALDAGQLVLDFLKWVSSKPNINVADEFFSYFVDYFGRRKDFKATHDVHV 600
            P+L++ TLN++L+AG+ VL F +W++S P     DE  SYFVDYFGRRKDFKAT  +  
Sbjct: 112 TPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFKATDKILS 171

Query: 601 DGIG--KTRLK*FESLVDRLVRAGRPTQAVVLFDKMEKEYGMARNLDPLKFIVSKLC 765
            G G  KT L    S VDRLVRAGR +QAV  F++MEK+YG+ R+   +K +V KLC
Sbjct: 172 GGGGGQKTLL----SAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVEKLC 224


>gb|AFK45023.1| unknown [Medicago truncatula]
          Length = 521

 Score =  157 bits (398), Expect = 2e-36
 Identities = 87/177 (49%), Positives = 118/177 (66%), Gaps = 2/177 (1%)
 Frame = +1

Query: 241 PFLLSVRLISSQTDGEAVKSPFLEEETIGKALSCELLKDPDVESPSLSQRLDLSFSHVPI 420
           P L  +   SS++  E V +   E + I  A+S ELLK+PD +  S++QRL+LSFSH+  
Sbjct: 54  PSLFQIEHFSSESKPEPVSTT--EPDPIAIAISSELLKEPDSDPSSVTQRLNLSFSHITP 111

Query: 421 MPSLVVNTLNIALDAGQLVLDFLKWVSSKPNINVADEFFSYFVDYFGRRKDFKATHDVHV 600
            P+L++ TLN++L+AG+ VL F +W++S P     DE  SYFVDYFGRRKDFKAT  +  
Sbjct: 112 TPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDFKATDKILS 171

Query: 601 DGIG--KTRLK*FESLVDRLVRAGRPTQAVVLFDKMEKEYGMARNLDPLKFIVSKLC 765
            G G  KT L    S VDRLVRAGR +QAV  F++MEK+YG+ R+   +K +V KLC
Sbjct: 172 GGGGGQKTLL----SAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVEKLC 224