BLASTX nr result

ID: Cephaelis21_contig00017119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017119
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY40730.1| F-box protein [Citrus trifoliata]                       92   1e-16
gb|AAO64811.1| At4g12510 [Arabidopsis thaliana] gi|110743182|dbj...    91   4e-16
ref|NP_568643.1| F-box protein SKIP31 [Arabidopsis thaliana] gi|...    91   4e-16
ref|XP_004170600.1| PREDICTED: F-box protein SKIP31-like [Cucumi...    91   5e-16
ref|XP_004142645.1| PREDICTED: F-box protein SKIP31-like [Cucumi...    91   5e-16

>gb|ABY40730.1| F-box protein [Citrus trifoliata]
          Length = 330

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
 Frame = +2

Query: 686 GLDKGKDSNE--SSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLN 859
           G D   ++N   + S+    PNR+DTG  S +PPELF ++LKFLSSEDLVSCSLVCRFLN
Sbjct: 58  GSDSISNNNNINNKSEIHSSPNRIDTGIFSKIPPELFTHMLKFLSSEDLVSCSLVCRFLN 117

Query: 860 FSASDESLWRRL 895
           ++ASDESLWRRL
Sbjct: 118 YAASDESLWRRL 129


>gb|AAO64811.1| At4g12510 [Arabidopsis thaliana] gi|110743182|dbj|BAE99482.1|
           putative F-box family protein [Arabidopsis thaliana]
          Length = 244

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +2

Query: 689 LDKGKDSNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSA 868
           L+K +D  E+ +  +    R+++G  +NVP ELFR+ILKFLSSEDLVSCSLVC+FLNF+A
Sbjct: 46  LEKDEDQKENGNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAA 105

Query: 869 SDESLWRRL 895
           +DESLWRRL
Sbjct: 106 ADESLWRRL 114


>ref|NP_568643.1| F-box protein SKIP31 [Arabidopsis thaliana]
           gi|75262483|sp|Q9FHK0.1|SKI31_ARATH RecName: Full=F-box
           protein SKIP31; AltName: Full=SKP1-interacting partner
           31 gi|9758726|dbj|BAB09164.1| unnamed protein product
           [Arabidopsis thaliana] gi|21593188|gb|AAM65137.1|
           unknown [Arabidopsis thaliana]
           gi|27754485|gb|AAO22690.1| putative F-box family protein
           [Arabidopsis thaliana] gi|28393963|gb|AAO42389.1|
           putative F-box family protein [Arabidopsis thaliana]
           gi|332007855|gb|AED95238.1| F-box protein SKIP31
           [Arabidopsis thaliana]
          Length = 316

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +2

Query: 689 LDKGKDSNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSA 868
           L+K +D  E+ +  +    R+++G  +NVP ELFR+ILKFLSSEDLVSCSLVC+FLNF+A
Sbjct: 46  LEKDEDQKENGNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAA 105

Query: 869 SDESLWRRL 895
           +DESLWRRL
Sbjct: 106 ADESLWRRL 114


>ref|XP_004170600.1| PREDICTED: F-box protein SKIP31-like [Cucumis sativus]
          Length = 320

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = +2

Query: 707 SNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSASDESLW 886
           ++ SS  +  +P R+++G  S +PPELFR+ILKFLSSEDL+SCSLVCRFLN +ASDESLW
Sbjct: 57  TSSSSQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLW 116

Query: 887 RRL 895
           RRL
Sbjct: 117 RRL 119


>ref|XP_004142645.1| PREDICTED: F-box protein SKIP31-like [Cucumis sativus]
          Length = 320

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 42/63 (66%), Positives = 53/63 (84%)
 Frame = +2

Query: 707 SNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSASDESLW 886
           ++ SS  +  +P R+++G  S +PPELFR+ILKFLSSEDL+SCSLVCRFLN +ASDESLW
Sbjct: 57  TSSSSQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLW 116

Query: 887 RRL 895
           RRL
Sbjct: 117 RRL 119


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