BLASTX nr result
ID: Cephaelis21_contig00017119
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00017119 (896 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABY40730.1| F-box protein [Citrus trifoliata] 92 1e-16 gb|AAO64811.1| At4g12510 [Arabidopsis thaliana] gi|110743182|dbj... 91 4e-16 ref|NP_568643.1| F-box protein SKIP31 [Arabidopsis thaliana] gi|... 91 4e-16 ref|XP_004170600.1| PREDICTED: F-box protein SKIP31-like [Cucumi... 91 5e-16 ref|XP_004142645.1| PREDICTED: F-box protein SKIP31-like [Cucumi... 91 5e-16 >gb|ABY40730.1| F-box protein [Citrus trifoliata] Length = 330 Score = 92.4 bits (228), Expect = 1e-16 Identities = 46/72 (63%), Positives = 56/72 (77%), Gaps = 2/72 (2%) Frame = +2 Query: 686 GLDKGKDSNE--SSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLN 859 G D ++N + S+ PNR+DTG S +PPELF ++LKFLSSEDLVSCSLVCRFLN Sbjct: 58 GSDSISNNNNINNKSEIHSSPNRIDTGIFSKIPPELFTHMLKFLSSEDLVSCSLVCRFLN 117 Query: 860 FSASDESLWRRL 895 ++ASDESLWRRL Sbjct: 118 YAASDESLWRRL 129 >gb|AAO64811.1| At4g12510 [Arabidopsis thaliana] gi|110743182|dbj|BAE99482.1| putative F-box family protein [Arabidopsis thaliana] Length = 244 Score = 90.9 bits (224), Expect = 4e-16 Identities = 43/69 (62%), Positives = 56/69 (81%) Frame = +2 Query: 689 LDKGKDSNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSA 868 L+K +D E+ + + R+++G +NVP ELFR+ILKFLSSEDLVSCSLVC+FLNF+A Sbjct: 46 LEKDEDQKENGNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAA 105 Query: 869 SDESLWRRL 895 +DESLWRRL Sbjct: 106 ADESLWRRL 114 >ref|NP_568643.1| F-box protein SKIP31 [Arabidopsis thaliana] gi|75262483|sp|Q9FHK0.1|SKI31_ARATH RecName: Full=F-box protein SKIP31; AltName: Full=SKP1-interacting partner 31 gi|9758726|dbj|BAB09164.1| unnamed protein product [Arabidopsis thaliana] gi|21593188|gb|AAM65137.1| unknown [Arabidopsis thaliana] gi|27754485|gb|AAO22690.1| putative F-box family protein [Arabidopsis thaliana] gi|28393963|gb|AAO42389.1| putative F-box family protein [Arabidopsis thaliana] gi|332007855|gb|AED95238.1| F-box protein SKIP31 [Arabidopsis thaliana] Length = 316 Score = 90.9 bits (224), Expect = 4e-16 Identities = 43/69 (62%), Positives = 56/69 (81%) Frame = +2 Query: 689 LDKGKDSNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSA 868 L+K +D E+ + + R+++G +NVP ELFR+ILKFLSSEDLVSCSLVC+FLNF+A Sbjct: 46 LEKDEDQKENGNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAA 105 Query: 869 SDESLWRRL 895 +DESLWRRL Sbjct: 106 ADESLWRRL 114 >ref|XP_004170600.1| PREDICTED: F-box protein SKIP31-like [Cucumis sativus] Length = 320 Score = 90.5 bits (223), Expect = 5e-16 Identities = 42/63 (66%), Positives = 53/63 (84%) Frame = +2 Query: 707 SNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSASDESLW 886 ++ SS + +P R+++G S +PPELFR+ILKFLSSEDL+SCSLVCRFLN +ASDESLW Sbjct: 57 TSSSSQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLW 116 Query: 887 RRL 895 RRL Sbjct: 117 RRL 119 >ref|XP_004142645.1| PREDICTED: F-box protein SKIP31-like [Cucumis sativus] Length = 320 Score = 90.5 bits (223), Expect = 5e-16 Identities = 42/63 (66%), Positives = 53/63 (84%) Frame = +2 Query: 707 SNESSSDRRPMPNRMDTGDSSNVPPELFRNILKFLSSEDLVSCSLVCRFLNFSASDESLW 886 ++ SS + +P R+++G S +PPELFR+ILKFLSSEDL+SCSLVCRFLN +ASDESLW Sbjct: 57 TSSSSQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLW 116 Query: 887 RRL 895 RRL Sbjct: 117 RRL 119