BLASTX nr result

ID: Cephaelis21_contig00017099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017099
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    99   1e-38
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               99   1e-38
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]    99   1e-38
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...    93   1e-32
ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-32

>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 99.4 bits (246), Expect(2) = 1e-38
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = +2

Query: 2   QLPTRDVISYCSIIQGLSIHGRGPQAVALFERMLKDGIVPDSIAFTVILTACSHTGLVQE 181
           ++P RD+ISYCS++QGLSIHG GPQAV+LF RML +G+ PD +AFTVILTACS  GLV E
Sbjct: 378 EMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDE 437

Query: 182 GC 187
           GC
Sbjct: 438 GC 439



 Score = 85.5 bits (210), Expect(2) = 1e-38
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = +3

Query: 195 SMVNEYSLKPSPDQYACIIDLLGRSGKLRTAYELLKSMPVEPHPGAWGAL 344
           SM  +YS+ PSPD YAC++DLLGR+G+L+ AYELLKSMPVEPH GAWGAL
Sbjct: 444 SMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGAL 493


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 99.4 bits (246), Expect(2) = 1e-38
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = +2

Query: 2   QLPTRDVISYCSIIQGLSIHGRGPQAVALFERMLKDGIVPDSIAFTVILTACSHTGLVQE 181
           ++P RD+ISYCS++QGLSIHG GPQAV+LF RML +G+ PD +AFTVILTACS  GLV E
Sbjct: 377 EMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDE 436

Query: 182 GC 187
           GC
Sbjct: 437 GC 438



 Score = 85.5 bits (210), Expect(2) = 1e-38
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = +3

Query: 195 SMVNEYSLKPSPDQYACIIDLLGRSGKLRTAYELLKSMPVEPHPGAWGAL 344
           SM  +YS+ PSPD YAC++DLLGR+G+L+ AYELLKSMPVEPH GAWGAL
Sbjct: 443 SMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGAL 492


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 99.4 bits (246), Expect(2) = 1e-38
 Identities = 44/62 (70%), Positives = 53/62 (85%)
 Frame = +2

Query: 2   QLPTRDVISYCSIIQGLSIHGRGPQAVALFERMLKDGIVPDSIAFTVILTACSHTGLVQE 181
           ++P RD+ISYCS++QGLSIHG GPQAV+LF RML +G+ PD +AFTVILTACS  GLV E
Sbjct: 363 EMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDE 422

Query: 182 GC 187
           GC
Sbjct: 423 GC 424



 Score = 85.5 bits (210), Expect(2) = 1e-38
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = +3

Query: 195 SMVNEYSLKPSPDQYACIIDLLGRSGKLRTAYELLKSMPVEPHPGAWGAL 344
           SM  +YS+ PSPD YAC++DLLGR+G+L+ AYELLKSMPVEPH GAWGAL
Sbjct: 429 SMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGAL 478


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score = 92.8 bits (229), Expect(2) = 1e-32
 Identities = 42/61 (68%), Positives = 51/61 (83%)
 Frame = +2

Query: 2   QLPTRDVISYCSIIQGLSIHGRGPQAVALFERMLKDGIVPDSIAFTVILTACSHTGLVQE 181
           ++P RD+ISYCS++QGLSIHG G QAV+LFERML + + PD +AFTVILTACS  GLV E
Sbjct: 382 KMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVDE 441

Query: 182 G 184
           G
Sbjct: 442 G 442



 Score = 72.4 bits (176), Expect(2) = 1e-32
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = +3

Query: 207 EYSLKPSPDQYACIIDLLGRSGKLRTAYELLKSMPVEPHPGAWGAL 344
           +YS+ PS D YACI+DLL RSG+L+ AYEL+KS+PV+ H GAWGAL
Sbjct: 452 KYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGAL 497


>ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|222855384|gb|EEE92931.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 89.4 bits (220), Expect(2) = 1e-32
 Identities = 39/60 (65%), Positives = 52/60 (86%)
 Frame = +2

Query: 5   LPTRDVISYCSIIQGLSIHGRGPQAVALFERMLKDGIVPDSIAFTVILTACSHTGLVQEG 184
           +P+RD+I  CS+IQGLSIHGRG +AV LF RML +G++PD++AFTVILTACS  GL+++G
Sbjct: 361 MPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDG 420



 Score = 75.9 bits (185), Expect(2) = 1e-32
 Identities = 32/51 (62%), Positives = 44/51 (86%)
 Frame = +3

Query: 192 NSMVNEYSLKPSPDQYACIIDLLGRSGKLRTAYELLKSMPVEPHPGAWGAL 344
           ++M N+YS+ PSP+ YAC++DLL R+G+LR AY+LLKSMP++PH  AWGAL
Sbjct: 425 DTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGAL 475


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