BLASTX nr result

ID: Cephaelis21_contig00017066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017066
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV71494.1| ATP synthase beta subunit [Marathrum cf. oxycarpu...    55   4e-13
gb|AFU95891.1| AtpB, partial (chloroplast) [Podostemum ceratophy...    55   4e-13
emb|CAB89985.1| ATP synthase beta subunit [Santalum album]             49   2e-12
ref|YP_784078.1| ATP synthase CF1 beta subunit [Pelargonium x ho...    50   2e-12
gb|ACN66375.1| ATP synthase beta chain [Parapachygone longifolia]      50   2e-12

>gb|ACV71494.1| ATP synthase beta subunit [Marathrum cf. oxycarpum Cachoeirc
           9/1996]
          Length = 495

 Score = 54.7 bits (130), Expect(2) = 4e-13
 Identities = 27/33 (81%), Positives = 30/33 (90%), Gaps = 1/33 (3%)
 Frame = -3

Query: 154 GGPLSVPVGRATLGRIF-MLGEPIDNLGLVSNN 59
           G PLSVPVG+ATLGRIF +LGEPIDNLGLV N+
Sbjct: 95  GAPLSVPVGKATLGRIFNVLGEPIDNLGLVDND 127



 Score = 44.7 bits (104), Expect(2) = 4e-13
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = -1

Query: 219 RVRPVAMSATDGLMRGMEVIDTGA 148
           RVR VAMSATDGL RGMEVIDTGA
Sbjct: 73  RVRAVAMSATDGLTRGMEVIDTGA 96


>gb|AFU95891.1| AtpB, partial (chloroplast) [Podostemum ceratophyllum]
          Length = 489

 Score = 54.7 bits (130), Expect(2) = 4e-13
 Identities = 27/33 (81%), Positives = 30/33 (90%), Gaps = 1/33 (3%)
 Frame = -3

Query: 154 GGPLSVPVGRATLGRIF-MLGEPIDNLGLVSNN 59
           G PLSVPVG+ATLGRIF +LGEPIDNLGLV N+
Sbjct: 90  GAPLSVPVGKATLGRIFNVLGEPIDNLGLVDND 122



 Score = 44.7 bits (104), Expect(2) = 4e-13
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = -1

Query: 219 RVRPVAMSATDGLMRGMEVIDTGA 148
           RVR VAMSATDGL RGMEVIDTGA
Sbjct: 68  RVRAVAMSATDGLRRGMEVIDTGA 91


>emb|CAB89985.1| ATP synthase beta subunit [Santalum album]
          Length = 469

 Score = 48.5 bits (114), Expect(2) = 2e-12
 Identities = 23/26 (88%), Positives = 25/26 (96%)
 Frame = -1

Query: 225 HYRVRPVAMSATDGLMRGMEVIDTGA 148
           +YRVR VAMSAT+GLMRGMEVIDTGA
Sbjct: 47  NYRVRAVAMSATEGLMRGMEVIDTGA 72



 Score = 48.1 bits (113), Expect(2) = 2e-12
 Identities = 24/30 (80%), Positives = 26/30 (86%), Gaps = 1/30 (3%)
 Frame = -3

Query: 154 GGPLSVPVGRATLGRIF-MLGEPIDNLGLV 68
           G PLSVPVG ATLGRIF +LGEP+DNLG V
Sbjct: 71  GAPLSVPVGEATLGRIFNVLGEPVDNLGPV 100


>ref|YP_784078.1| ATP synthase CF1 beta subunit [Pelargonium x hortorum]
           gi|122164272|sp|Q06FV3.1|ATPB_PELHO RecName: Full=ATP
           synthase subunit beta, chloroplastic; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta gi|112382076|gb|ABI17269.1| ATP synthase
           CF1 beta subunit [Pelargonium x hortorum]
          Length = 498

 Score = 49.7 bits (117), Expect(2) = 2e-12
 Identities = 25/32 (78%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = -3

Query: 154 GGPLSVPVGRATLGRIF-MLGEPIDNLGLVSN 62
           G PLSVPVG ATLGRIF +LGEP+DNLG V N
Sbjct: 95  GAPLSVPVGGATLGRIFNVLGEPVDNLGPVDN 126



 Score = 47.0 bits (110), Expect(2) = 2e-12
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -1

Query: 219 RVRPVAMSATDGLMRGMEVIDTGA 148
           RVR VAMSATDGLMRGMEVIDTGA
Sbjct: 73  RVRAVAMSATDGLMRGMEVIDTGA 96


>gb|ACN66375.1| ATP synthase beta chain [Parapachygone longifolia]
          Length = 489

 Score = 49.7 bits (117), Expect(2) = 2e-12
 Identities = 25/32 (78%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = -3

Query: 154 GGPLSVPVGRATLGRIF-MLGEPIDNLGLVSN 62
           G PLSVPVG ATLGRIF +LGEP+DNLG V N
Sbjct: 89  GAPLSVPVGGATLGRIFNVLGEPVDNLGPVDN 120



 Score = 47.0 bits (110), Expect(2) = 2e-12
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -1

Query: 219 RVRPVAMSATDGLMRGMEVIDTGA 148
           RVR VAMSATDGLMRGMEVIDTGA
Sbjct: 67  RVRAVAMSATDGLMRGMEVIDTGA 90


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