BLASTX nr result

ID: Cephaelis21_contig00017050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017050
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               70   7e-10
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    65   2e-08
emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]    60   9e-07
ref|XP_002334849.1| predicted protein [Populus trichocarpa] gi|2...    58   3e-06
ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|2...    57   6e-06

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
 Frame = +1

Query: 172  KWKITVMQLSWNSDSAALI-LNCDGSSIAKNTKAAGGGILRDISGKMXXXXXXXXGHGSN 348
            KWKI    + WN+ +   + +N DGS  + N  A  G I+RD + +M           SN
Sbjct: 741  KWKI----VHWNTPNINCVKINTDGSFSSGN--AGLGWIVRDHTRRMIMAFSIPSSCSSN 794

Query: 349  MCAEXXXXXXXXXXXXKMNAQNITVKCDSKVLIDMLHGSSAIPWKLNSTIKKISRYKARI 528
              AE            +    N  ++ DSK+++DM+    A   K+   ++ I +  A++
Sbjct: 795  NLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLKIKGVVEDIIQVVAKM 854

Query: 529  -LELKHCYREANSVADALAKEAQVHQSFQFY 618
              E+ HCYREAN VADALAK A +      Y
Sbjct: 855  NCEVNHCYREANQVADALAKHAVISNEAHMY 885


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
 Frame = +1

Query: 229  LNCDGSSIAKNTKAAGGGILRDISGKMXXXXXXXXGHGSNMCAEXXXXXXXXXXXXKMNA 408
            LN DGS +  N +  GGGILR+  G++        G G++  AE            +   
Sbjct: 1002 LNTDGSCV--NGRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRGV 1059

Query: 409  QNITVKCDSKVLIDMLHGSSAIPWKLNSTIKKISR-YKARILELKHCYREANSVADALAK 585
              I  + DS +L   +  + +IPW++   +KKI +  +     + HC REAN  AD LA 
Sbjct: 1060 NMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLAS 1119

Query: 586  EAQVHQSFQFYVSESEVSSNVRALIYMDSRNICNFR 693
             +        + S + + S V+ L+ +D  N+  FR
Sbjct: 1120 ISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155


>emb|CAN75081.1| hypothetical protein VITISV_027743 [Vitis vinifera]
          Length = 395

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
 Frame = +1

Query: 199 SWNSDSAALI-LNCDGSSIAKNTKAAGGGILRDISGKMXXXXXXXXGHGSNMCAEXXXXX 375
           SW+   A  + LN DGS   +  +A GGG+LRD  G             +++ AE     
Sbjct: 226 SWHRPGAGWVKLNFDGSFKGRTGRAGGGGLLRDAQGSFIAAFATPLDTSNSLMAEIGALE 285

Query: 376 XXXXXXXKMNAQNITVKCDSKVLIDMLHGSSAIPWKLNSTIKKISRYKARILEL------ 537
                  K+N + I ++ DSK+ I+ML G      K   T ++       I EL      
Sbjct: 286 GGLRLALKLNVERILIEGDSKITIEMLSG------KREXTXEEEKSLMTHIRELLQGFQE 339

Query: 538 ---KHCYREANSVADALAKEA-QVHQSFQFY 618
              +H +REAN  AD LA  A Q H+  +++
Sbjct: 340 VTARHEFREANRPADHLANIATQAHEPMEWH 370


>ref|XP_002334849.1| predicted protein [Populus trichocarpa] gi|222875212|gb|EEF12343.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 7/212 (3%)
 Frame = +1

Query: 1   TMWKAQNSGKFKSVKQSSSSIIFNIANLIFSWVQNKFQEVKLSAANWFSFMDS-ITAFKW 177
           ++W  +N   F+    +  S+ F I   +  W++    +   S ++     +  I  FKW
Sbjct: 21  SLWLLRNDLIFQQKSPNYDSLFFLIITRLCLWLKALHPDFPYSPSDLLRSAEGLIRCFKW 80

Query: 178 KITVMQLSWNSDSAALILNCDGSSIAKNTKAAGGGILRDISGKMXXXXXXXXGHGSNMCA 357
                             N DGSS+ K   +  GG+LR+  G +        G   +  A
Sbjct: 81  ------------------NVDGSSLGKPGLSGIGGVLRNHHGHLLDIFSLPVGILDSNIA 122

Query: 358 EXXXXXXXXXXXXK---MNAQNITVKCDSKVLIDMLHGSSAIPW---KLNSTIKKISRYK 519
           E                ++ ++IT++ DS  +I  +H S    W   +L ST+++++R+ 
Sbjct: 123 ELRAVVKAVELSASNCLLHHKHITIESDSANVISWMHNSHNRLWMHRELFSTVQRLTRFF 182

Query: 520 ARILELKHCYREANSVADALAKEAQVHQSFQF 615
             I    H YRE+NS+AD +AK+  V +S  F
Sbjct: 183 GSIT-FSHVYRESNSLADCMAKQG-VRRSSDF 212


>ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|222847134|gb|EEE84681.1|
            predicted protein [Populus trichocarpa]
          Length = 1221

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 10/201 (4%)
 Frame = +1

Query: 16   QNSGKFKSVKQSSSSIIFNIANLIFSWVQNKFQEVKLSAANWFSFMDSITAFKW---KIT 186
            QN   F+    S  +I F I   +  W++    +   S ++    ++ +   +W   +IT
Sbjct: 1014 QNDLIFQQKSPSYDTIFFLIITRLCLWLKAFHPDFPYSPSDLLRSVEGL--IRWSNVQIT 1071

Query: 187  VMQLSWNSDS-AALILNCDGSSIAKNTKAAGGGILRDISGKMXXXXXXXXGHGSNMCAEX 363
               + W+  +  +   N DGSS+ K   +  GG+LR+  G +        G   +  AE 
Sbjct: 1072 RTGVIWSPPTIGSFKWNVDGSSLGKPGLSGIGGVLRNHHGHLLGIFSLPVGILDSNIAEL 1131

Query: 364  XXXXXXXXXXXK---MNAQNITVKCDSKVLIDMLHGSSAIPW---KLNSTIKKISRYKAR 525
                           ++ ++IT++ DS  +I  +H     PW   +L ST+++++R+   
Sbjct: 1132 RAVVKAVELSASNRLLHHKHITIESDSTNVISWMHNPHNRPWMHWELFSTVQRLTRFFGS 1191

Query: 526  ILELKHCYREANSVADALAKE 588
            I    H YRE+N++AD +AK+
Sbjct: 1192 IT-FAHVYRESNNMADCMAKQ 1211


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