BLASTX nr result

ID: Cephaelis21_contig00017015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017015
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511477.1| pentatricopeptide repeat-containing protein,...   114   2e-23
ref|XP_002322139.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi...   112   8e-23
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22

>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 754

 Score =  114 bits (285), Expect = 2e-23
 Identities = 57/70 (81%), Positives = 62/70 (88%)
 Frame = +2

Query: 509 STSVYARTKSKELVLGNPSVAVEKGKYSYDVETFINKLSSLPPRGSIARCLENFKNKLAL 688
           S +  AR K+KELVLGNPSV VEKGKYSYDVET INKLSSLPPRGSIARCLE FKNKL+L
Sbjct: 47  SGAAKARAKTKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLEIFKNKLSL 106

Query: 689 SDFSQVFKEF 718
           +DF+ VFKEF
Sbjct: 107 NDFALVFKEF 116


>ref|XP_002322139.1| predicted protein [Populus trichocarpa] gi|222869135|gb|EEF06266.1|
           predicted protein [Populus trichocarpa]
          Length = 866

 Score =  112 bits (281), Expect = 6e-23
 Identities = 61/94 (64%), Positives = 69/94 (73%)
 Frame = +2

Query: 437 PFPAKLPSLHFATFHLLRRRHLLPSTSVYARTKSKELVLGNPSVAVEKGKYSYDVETFIN 616
           PFP         +F   R+ +   S +  AR K KELVLGNPSV VEKGKYSYDVET IN
Sbjct: 27  PFPILPSHRRLVSFSSDRKAY---SGAWKARAKPKELVLGNPSVVVEKGKYSYDVETLIN 83

Query: 617 KLSSLPPRGSIARCLENFKNKLALSDFSQVFKEF 718
           KLSSLPPRGSIARCL+ FKNKL+L+DF+ VFKEF
Sbjct: 84  KLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEF 117


>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  112 bits (280), Expect = 8e-23
 Identities = 66/124 (53%), Positives = 79/124 (63%), Gaps = 16/124 (12%)
 Frame = +2

Query: 395 SISLSQCSRPTAIRPFPAKL---PSLHFATFHLLRRRHLLPS-------------TSVYA 526
           S+ +S  +  T +RP    L   P+L+         RHL P+             ++   
Sbjct: 6   SLLISSSTSATLLRPSHVNLRPNPNLN---------RHLFPAKATDFFGYQRILASAARI 56

Query: 527 RTKSKELVLGNPSVAVEKGKYSYDVETFINKLSSLPPRGSIARCLENFKNKLALSDFSQV 706
           R K KELVLGNPSV VEKGKYSYDVET INKLSSLPPRGSIARCL+ FKNKL+L+DF+ V
Sbjct: 57  RAKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 116

Query: 707 FKEF 718
           FKEF
Sbjct: 117 FKEF 120


>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  110 bits (275), Expect = 3e-22
 Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 5/95 (5%)
 Frame = +2

Query: 449 KLPSLHFATFHLLRRRHL-----LPSTSVYARTKSKELVLGNPSVAVEKGKYSYDVETFI 613
           +LP L   +   +RRR       L S     R K+K+LVLGNPSV VEKGKYSYDVET I
Sbjct: 28  QLPFLSKLSNFSVRRRFFSDDWRLSSDVGKVRAKAKDLVLGNPSVIVEKGKYSYDVETLI 87

Query: 614 NKLSSLPPRGSIARCLENFKNKLALSDFSQVFKEF 718
           NKLSSLPPRGSIARCL+ FKN+L+L+DFS VFKEF
Sbjct: 88  NKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEF 122


>ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  110 bits (275), Expect = 3e-22
 Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 5/95 (5%)
 Frame = +2

Query: 449 KLPSLHFATFHLLRRRHL-----LPSTSVYARTKSKELVLGNPSVAVEKGKYSYDVETFI 613
           +LP L   +   +RRR       L S     R K+K+LVLGNPSV VEKGKYSYDVET I
Sbjct: 28  QLPFLSKLSNFSVRRRFFSDDWRLSSDVGKVRAKAKDLVLGNPSVIVEKGKYSYDVETLI 87

Query: 614 NKLSSLPPRGSIARCLENFKNKLALSDFSQVFKEF 718
           NKLSSLPPRGSIARCL+ FKN+L+L+DFS VFKEF
Sbjct: 88  NKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEF 122


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