BLASTX nr result

ID: Cephaelis21_contig00017012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017012
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14973.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat...   163   1e-38
emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]   157   1e-36
ref|XP_002511339.1| pentatricopeptide repeat-containing protein,...   147   9e-34
ref|XP_002322190.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>emb|CBI14973.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/129 (61%), Positives = 94/129 (72%)
 Frame = -3

Query: 388 EKFDINGFRILHAGLVVSGFGLDSICSSALVSAYSKLGHVDEAGKVFYGIVEPDLVLWNS 209
           E FD +G R++H G+VVSG G DS+C SALV+AYSKL  VDEA +VFYG+ EPDLVLWN+
Sbjct: 122 ENFDPDGLRVVHGGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEPDLVLWNA 181

Query: 208 MIXXXXXXXXSRKGLELFNRMRVLGECPDGYTMVGLIMGLNDPTLVRIGETIHGFCKKCG 29
           M           KGL+LF+ MR +GE PD YTMVGLI GL DP+L+ IG+ IHGFC K  
Sbjct: 182 MAAGYGYCGFWDKGLQLFSAMRSMGEQPDSYTMVGLISGLADPSLLGIGKGIHGFCLKSS 241

Query: 28  FDSNDHVNS 2
           FD NDHV S
Sbjct: 242 FDCNDHVGS 250


>ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g64310-like [Vitis vinifera]
          Length = 560

 Score =  163 bits (413), Expect = 1e-38
 Identities = 79/129 (61%), Positives = 94/129 (72%)
 Frame = -3

Query: 388 EKFDINGFRILHAGLVVSGFGLDSICSSALVSAYSKLGHVDEAGKVFYGIVEPDLVLWNS 209
           E FD +G R++H G+VVSG G DS+C SALV+AYSKL  VDEA +VFYG+ EPDLVLWN+
Sbjct: 122 ENFDPDGLRVVHGGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEPDLVLWNA 181

Query: 208 MIXXXXXXXXSRKGLELFNRMRVLGECPDGYTMVGLIMGLNDPTLVRIGETIHGFCKKCG 29
           M           KGL+LF+ MR +GE PD YTMVGLI GL DP+L+ IG+ IHGFC K  
Sbjct: 182 MAAGYGYCGFWDKGLQLFSAMRSMGEQPDSYTMVGLISGLADPSLLGIGKGIHGFCLKSS 241

Query: 28  FDSNDHVNS 2
           FD NDHV S
Sbjct: 242 FDCNDHVGS 250


>emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]
          Length = 560

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/129 (59%), Positives = 91/129 (70%)
 Frame = -3

Query: 388 EKFDINGFRILHAGLVVSGFGLDSICSSALVSAYSKLGHVDEAGKVFYGIVEPDLVLWNS 209
           E FD +G R++H G+VVSG G DS+C SALV+AYSKL  VDEA +VFYG+ E DLVLWN+
Sbjct: 122 ENFDPDGLRVVHGGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEQDLVLWNA 181

Query: 208 MIXXXXXXXXSRKGLELFNRMRVLGECPDGYTMVGLIMGLNDPTLVRIGETIHGFCKKCG 29
           M           KGL+LF+ MR +GE PD YTMVGLI GL DP L+ IG+ IHGFC K  
Sbjct: 182 MAAGYGYCGFWDKGLQLFSAMRSMGEQPDSYTMVGLISGLADPNLLGIGKGIHGFCLKSS 241

Query: 28  FDSNDHVNS 2
           FD N HV S
Sbjct: 242 FDCNAHVGS 250


>ref|XP_002511339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550454|gb|EEF51941.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 428

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/130 (56%), Positives = 94/130 (72%), Gaps = 1/130 (0%)
 Frame = -3

Query: 388 EKFDINGFRILHAGLVVSGFGLDSICSSALVSAYSKLGHVDEAGKVFYGIVEPDLVLWNS 209
           E FD++G R+LH G++VSG G+DS+  SALV+AYSK+ +V EA KVF GI EPD+VLWNS
Sbjct: 22  ENFDLDGLRVLHGGVIVSGLGIDSVSCSALVTAYSKMNYVREASKVFKGIFEPDMVLWNS 81

Query: 208 MIXXXXXXXXSRKGLELFNRMRV-LGECPDGYTMVGLIMGLNDPTLVRIGETIHGFCKKC 32
           MI          KGLELFN+MR    + PDG+T+VGLI GL D +L+RIG+ +HG C K 
Sbjct: 82  MISGYSYCGFWNKGLELFNQMRENRKQQPDGFTLVGLISGLMDFSLLRIGQGVHGLCLKT 141

Query: 31  GFDSNDHVNS 2
           GF+ N +V S
Sbjct: 142 GFNCNAYVGS 151


>ref|XP_002322190.1| predicted protein [Populus trichocarpa] gi|222869186|gb|EEF06317.1|
           predicted protein [Populus trichocarpa]
          Length = 459

 Score =  139 bits (349), Expect = 3e-31
 Identities = 71/130 (54%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
 Frame = -3

Query: 388 EKFDINGFRILHAGLVVSGFGLDSICSSALVSAYSKLGHVDEAGKVFYGIVEPDLVLWNS 209
           E F ++G RI+H G++VSG GLDS+  SALV+ YSK+G V EA KVF G+ EPDLVLWN+
Sbjct: 22  EDFYVDGLRIVHGGVIVSGLGLDSVTCSALVTGYSKMGLVGEASKVFCGVFEPDLVLWNA 81

Query: 208 MIXXXXXXXXSRKGLELFNRMRVLG-ECPDGYTMVGLIMGLNDPTLVRIGETIHGFCKKC 32
           MI          KGL  FN MR  G + PDGYT V LI GL + + + +G+ IHG C K 
Sbjct: 82  MISGCGYCGFGDKGLLFFNEMRDNGNKRPDGYTFVALISGLANSSSLELGQGIHGLCLKS 141

Query: 31  GFDSNDHVNS 2
           GFD NDHV S
Sbjct: 142 GFDCNDHVGS 151



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/119 (28%), Positives = 59/119 (49%)
 Frame = -3

Query: 358 LHAGLVVSGFGLDSICSSALVSAYSKLGHVDEAGKVFYGIVEPDLVLWNSMIXXXXXXXX 179
           +H   + SGF  +    S+LVS YS+   ++ A  VF  + +PDLV W+++I        
Sbjct: 134 IHGLCLKSGFDCNDHVGSSLVSMYSRFSCINLAYSVFRSLCQPDLVTWSALITGFSQAGE 193

Query: 178 SRKGLELFNRMRVLGECPDGYTMVGLIMGLNDPTLVRIGETIHGFCKKCGFDSNDHVNS 2
             K L  +  + + G+ PD   +  +++       V  G  IHG+  + GF+S+  V+S
Sbjct: 194 HEKALLFYKNLNLAGKKPDSVLIASVLVATAQLANVGPGAQIHGYIVRYGFESHVMVSS 252


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