BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00017004
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    70   6e-13
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]         70   6e-13
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    67   5e-12
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    68   6e-12
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    67   8e-12

>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 69.7 bits (169), Expect(2) = 6e-13
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = -3

Query: 182  PNYSLSYFKLPKSLCKKLESKKAEHWWGGTREKRKIHWIKWEKLTDNKATGGLEFRDI 9
            P Y++  FK+P+  C++ E      WWG  + ++K+HWI WEKLT  K  GGL FRDI
Sbjct: 1053 PTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVHWIAWEKLTSPKLLGGLGFRDI 1110



 Score = 28.9 bits (63), Expect(2) = 6e-13
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -1

Query: 289  FKNILEATEGKIAS*KNRFLNNVGKEILLKSVA 191
            F+ I E  E ++     RFL+  GKE L+KSVA
Sbjct: 1017 FQPIKERFEKRLTDWSERFLSLAGKEALIKSVA 1049


>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
          Length = 1205

 Score = 69.7 bits (169), Expect(2) = 6e-13
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = -3

Query: 182 PNYSLSYFKLPKSLCKKLESKKAEHWWGGTREKRKIHWIKWEKLTDNKATGGLEFRDI 9
           P Y++  FK+P+  C++ E      WWG  + ++K+HWI WEKLT  K  GGL FRDI
Sbjct: 789 PTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVHWIAWEKLTSPKLLGGLGFRDI 846



 Score = 28.9 bits (63), Expect(2) = 6e-13
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -1

Query: 289 FKNILEATEGKIAS*KNRFLNNVGKEILLKSVA 191
           F+ I E  E ++     RFL+  GKE L+KSVA
Sbjct: 753 FQPIKERFEKRLTDWSERFLSLAGKEALIKSVA 785


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 66.6 bits (161), Expect(2) = 5e-12
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -3

Query: 188 TFPNYSLSYFKLPKSLCKKLESKKAEHWWGGTREKRKIHWIKWEKLTDNKATGGLEFRDI 9
           T P Y +S F+LPK++  KL S  A+ WW    + R +HW+ W+KL  +K+ GGL FR++
Sbjct: 583 TLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFRNV 642



 Score = 28.9 bits (63), Expect(2) = 5e-12
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 295 KVFKNILEATEGKIAS*KNRFLNNVGKEILLKSVA 191
           KVF  + +  + +I     +FL+  GKE+++KSVA
Sbjct: 547 KVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVA 581


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 68.2 bits (165), Expect(2) = 6e-12
 Identities = 29/60 (48%), Positives = 38/60 (63%)
 Frame = -3

Query: 188 TFPNYSLSYFKLPKSLCKKLESKKAEHWWGGTREKRKIHWIKWEKLTDNKATGGLEFRDI 9
           + P YS+S FKLP +LC+K++S     WW    + RK  W+ W KLT+ K  GGL FRDI
Sbjct: 694 SMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGLGFRDI 753



 Score = 26.9 bits (58), Expect(2) = 6e-12
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 292 VFKNILEATEGKIAS*KNRFLNNVGKEILLKSV 194
           +F  I++    K  S  +RFL+  GK+++LK+V
Sbjct: 659 IFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAV 691


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 67.0 bits (162), Expect(2) = 8e-12
 Identities = 28/63 (44%), Positives = 41/63 (65%)
 Frame = -3

Query: 191 NTFPNYSLSYFKLPKSLCKKLESKKAEHWWGGTREKRKIHWIKWEKLTDNKATGGLEFRD 12
           ++ P+Y++  FKLP SLCK+++S     WW    +KRK+ W+ W+KLT     GGL FR+
Sbjct: 739 SSMPSYAMMCFKLPASLCKQIQSVLTRFWWDSKPDKRKMAWVSWDKLTLPINEGGLGFRE 798

Query: 11  ISA 3
           I A
Sbjct: 799 IEA 801



 Score = 27.7 bits (60), Expect(2) = 8e-12
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -1

Query: 292 VFKNILEATEGKIAS*KNRFLNNVGKEILLKSV 194
           +F +I++    +  S   RFL++ GK+ILLK+V
Sbjct: 705 IFSSIVDRIRQRSHSWSIRFLSSAGKQILLKAV 737