BLASTX nr result

ID: Cephaelis21_contig00016858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016858
         (2230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...    67   2e-08
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...    67   2e-08
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-07
ref|NP_200425.1| RNA-binding KH domain-containing protein [Arabi...    63   3e-07
ref|XP_002864436.1| KH domain-containing protein [Arabidopsis ly...    63   3e-07

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +3

Query: 555 VEHEKYLAELLAERHKLSPFMPVLPHTYRLLNQSRLEI 668
           VE EKYL+ELLAERHKLSPFMPVLPH+YRLLNQ  L +
Sbjct: 33  VEQEKYLSELLAERHKLSPFMPVLPHSYRLLNQEILRV 70


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 31/38 (81%), Positives = 34/38 (89%)
 Frame = +3

Query: 555 VEHEKYLAELLAERHKLSPFMPVLPHTYRLLNQSRLEI 668
           VE EKYL+ELLAERHKLSPFMPVLPHTYRLL+Q  L +
Sbjct: 43  VEQEKYLSELLAERHKLSPFMPVLPHTYRLLSQEILRV 80


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = +3

Query: 555 VEHEKYLAELLAERHKLSPFMPVLPHTYRLLNQSRLEI 668
           VE EKYL+ELLAERHK+SPF+PVLP+TYRLLNQ  L +
Sbjct: 45  VEQEKYLSELLAERHKISPFLPVLPNTYRLLNQEILRV 82


>ref|NP_200425.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|75262628|sp|Q9FKT4.1|QKIL2_ARATH RecName: Full=KH
           domain-containing protein At5g56140; AltName:
           Full=Quaking-like protein 2 gi|9758634|dbj|BAB09296.1|
           RNA-binding protein-like [Arabidopsis thaliana]
           gi|24030184|gb|AAN41273.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|332009342|gb|AED96725.1|
           RNA-binding KH domain-containing protein [Arabidopsis
           thaliana]
          Length = 315

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = +3

Query: 555 VEHEKYLAELLAERHKLSPFMPVLPHTYRLLNQSRLEI 668
           VE EKYL+ELLAERHKL+PF+PVLPH +RLLNQ  L +
Sbjct: 60  VEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEILRV 97


>ref|XP_002864436.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310271|gb|EFH40695.1| KH domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = +3

Query: 555 VEHEKYLAELLAERHKLSPFMPVLPHTYRLLNQ 653
           VE EKYL+ELLAERHKL+PF+PVLPH YRLLNQ
Sbjct: 54  VEQEKYLSELLAERHKLTPFLPVLPHAYRLLNQ 86


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