BLASTX nr result

ID: Cephaelis21_contig00016809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016809
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...    49   2e-12
ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2...    50   2e-11
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209...    53   4e-11
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi...    48   8e-11
ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263...    52   2e-10

>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score = 48.9 bits (115), Expect(2) = 2e-12
 Identities = 32/106 (30%), Positives = 43/106 (40%)
 Frame = +3

Query: 3   SSTKKSTSPEHSATYGADITQPPALVPFQSLELSTLAPFSCVEDALCATFY*SLLLVYGG 182
           S +KK + P+H+A  G++ITQP AL+                               +GG
Sbjct: 28  SKSKKKSPPKHAAAIGSNITQPTALIS------------------------------HGG 57

Query: 183 CFFFSFY*LKQQKLANMWVFMSLDDHDSK*EILRQFDMNMAYGPCI 320
                                  DD+D   E+LRQFDMNMAYGPC+
Sbjct: 58  ALDLQ------------------DDYDKNEEVLRQFDMNMAYGPCL 85



 Score = 48.9 bits (115), Expect(2) = 2e-12
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = +2

Query: 320 IGMSRLARWELAKALGLNPPQDLQHLLKAGKVQAE 424
           +GM+R+ RWE A+ LGLNPP+ ++ LLK GKV +E
Sbjct: 85  LGMTRVGRWERAQRLGLNPPKQIEDLLKGGKVNSE 119


>ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score = 50.4 bits (119), Expect(2) = 2e-11
 Identities = 22/35 (62%), Positives = 30/35 (85%)
 Frame = +2

Query: 320 IGMSRLARWELAKALGLNPPQDLQHLLKAGKVQAE 424
           +GMSRLARWE A+ LGLNPP++++ LLK  KV++E
Sbjct: 80  LGMSRLARWERAQRLGLNPPKEIEGLLKGEKVRSE 114



 Score = 43.9 bits (102), Expect(2) = 2e-11
 Identities = 34/106 (32%), Positives = 42/106 (39%)
 Frame = +3

Query: 3   SSTKKSTSPEHSATYGADITQPPALVPFQSLELSTLAPFSCVEDALCATFY*SLLLVYGG 182
           +ST KS S  H+AT G+DITQP ALV   S +L                           
Sbjct: 25  TSTSKS-SLIHAATLGSDITQPTALVSHDSPDLK-------------------------- 57

Query: 183 CFFFSFY*LKQQKLANMWVFMSLDDHDSK*EILRQFDMNMAYGPCI 320
                                  DD+D   ++LRQFDMN AYGPC+
Sbjct: 58  -----------------------DDYDKHEDVLRQFDMNPAYGPCL 80


>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
           gi|449523375|ref|XP_004168699.1| PREDICTED:
           uncharacterized protein LOC101228956 [Cucumis sativus]
          Length = 125

 Score = 53.1 bits (126), Expect(2) = 4e-11
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +2

Query: 320 IGMSRLARWELAKALGLNPPQDLQHLLKAGKVQAE 424
           +GM+R+ARWE A +LGLNPP+D+  LLKAGKVQ E
Sbjct: 84  LGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 118



 Score = 40.4 bits (93), Expect(2) = 4e-11
 Identities = 30/105 (28%), Positives = 39/105 (37%)
 Frame = +3

Query: 6   STKKSTSPEHSATYGADITQPPALVPFQSLELSTLAPFSCVEDALCATFY*SLLLVYGGC 185
           S++K+ SP +SA+ G+D  QP ALV   SL+L                            
Sbjct: 29  SSRKTKSPANSASLGSDAVQPAALVSHGSLDLQ--------------------------- 61

Query: 186 FFFSFY*LKQQKLANMWVFMSLDDHDSK*EILRQFDMNMAYGPCI 320
                                 DD+      LRQFDMN AYGPC+
Sbjct: 62  ----------------------DDYGVSENTLRQFDMNTAYGPCL 84


>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
           lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
           subunit 4 family [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score = 47.8 bits (112), Expect(2) = 8e-11
 Identities = 20/35 (57%), Positives = 27/35 (77%)
 Frame = +2

Query: 320 IGMSRLARWELAKALGLNPPQDLQHLLKAGKVQAE 424
           +GM+RL RWE A  LG+NPP +++ LLK GKVQ +
Sbjct: 81  LGMTRLDRWERALRLGMNPPNEIEKLLKTGKVQQD 115



 Score = 44.7 bits (104), Expect(2) = 8e-11
 Identities = 27/104 (25%), Positives = 43/104 (41%)
 Frame = +3

Query: 9   TKKSTSPEHSATYGADITQPPALVPFQSLELSTLAPFSCVEDALCATFY*SLLLVYGGCF 188
           + +  +P+H+A  G+D+ QP AL+   SL+L+                            
Sbjct: 27  SSRKVTPKHAAAQGSDVIQPAALISHGSLDLN---------------------------- 58

Query: 189 FFSFY*LKQQKLANMWVFMSLDDHDSK*EILRQFDMNMAYGPCI 320
                                +D+D + E+LRQFDMN+AYGPC+
Sbjct: 59  ---------------------EDYDKEEEMLRQFDMNIAYGPCL 81


>ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263057 [Vitis vinifera]
          Length = 122

 Score = 51.6 bits (122), Expect(2) = 2e-10
 Identities = 22/35 (62%), Positives = 30/35 (85%)
 Frame = +2

Query: 320 IGMSRLARWELAKALGLNPPQDLQHLLKAGKVQAE 424
           +GMSRLARWE A+ LGLNPP++++ LLK GK +A+
Sbjct: 81  LGMSRLARWERAQRLGLNPPKEIETLLKQGKARAD 115



 Score = 39.7 bits (91), Expect(2) = 2e-10
 Identities = 15/23 (65%), Positives = 19/23 (82%)
 Frame = +3

Query: 252 DDHDSK*EILRQFDMNMAYGPCI 320
           D++D    +LRQFDMNMAYGPC+
Sbjct: 59  DEYDGNETVLRQFDMNMAYGPCL 81


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