BLASTX nr result
ID: Cephaelis21_contig00016734
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00016734
(347 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tab... 110 1e-45
ref|XP_004150238.1| PREDICTED: pollen-specific protein SF3-like ... 110 4e-45
ref|XP_004167859.1| PREDICTED: LOW QUALITY PROTEIN: pollen-speci... 110 3e-44
ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricin... 109 4e-44
gb|ACX47456.1| LIM1 [Hevea brasiliensis] 110 6e-44
>gb|AAD56951.1|AF184886_1 LIM domain protein WLIM2 [Nicotiana tabacum]
gi|1841464|emb|CAA71891.1| LIM-domain SF3 protein
[Nicotiana tabacum]
Length = 189
Score = 110 bits (275), Expect(2) = 1e-45
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = +2
Query: 2 TRSPSKAASMFSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSHGGCSL 157
TRSPSKAA MFSGTQ+KCATCGKTAYPLEKVTVENQSYHK+CFKCSHGGCSL
Sbjct: 91 TRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVENQSYHKTCFKCSHGGCSL 142
Score = 98.2 bits (243), Expect(2) = 1e-45
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKSASMKR 347
SHGGCSLSPSNYAAL+GILYCKPHFSQLFKEKGSYNHLIKSASMKR
Sbjct: 136 SHGGCSLSPSNYAALNGILYCKPHFSQLFKEKGSYNHLIKSASMKR 181
Score = 57.0 bits (136), Expect(2) = 7e-16
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +2
Query: 32 FSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSH 142
F GTQ KC C KT YP+E ++ + +YHKSCFKCSH
Sbjct: 3 FIGTQQKCKACEKTVYPVELLSADGVNYHKSCFKCSH 39
Score = 51.6 bits (122), Expect(2) = 7e-16
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKS 332
SH +L SN+++++G+LYCKPHF QLFKE G++N +S
Sbjct: 38 SHCKGTLKLSNFSSMEGVLYCKPHFEQLFKESGNFNKNFQS 78
>ref|XP_004150238.1| PREDICTED: pollen-specific protein SF3-like isoform 1 [Cucumis
sativus] gi|449465045|ref|XP_004150239.1| PREDICTED:
pollen-specific protein SF3-like isoform 2 [Cucumis
sativus]
Length = 195
Score = 110 bits (274), Expect(2) = 4e-45
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 2 TRSPSKAASMFSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSHGGCSL 157
TRSPSKAASMFSGTQ+KCATCGKTAYPLEKVTVE+Q+YHKSCFKCSHGGCSL
Sbjct: 91 TRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSL 142
Score = 96.7 bits (239), Expect(2) = 4e-45
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKSASMKR 347
SHGGCSLSPSNYAALDGILYCK HFSQLFKEKGSYNHLIKSASMKR
Sbjct: 136 SHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMKR 181
Score = 57.0 bits (136), Expect(2) = 5e-16
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 32 FSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSH 142
F GTQ KC C KT YP+++++ + S+HKSCFKCSH
Sbjct: 3 FIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSH 39
Score = 52.0 bits (123), Expect(2) = 5e-16
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYN 317
SH +L SNY+++DG+LYCKPHF QLFKE G+++
Sbjct: 38 SHCKGTLKLSNYSSMDGVLYCKPHFEQLFKETGNFS 73
>ref|XP_004167859.1| PREDICTED: LOW QUALITY PROTEIN: pollen-specific protein SF3-like
[Cucumis sativus]
Length = 195
Score = 110 bits (274), Expect(2) = 3e-44
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 2 TRSPSKAASMFSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSHGGCSL 157
TRSPSKAASMFSGTQ+KCATCGKTAYPLEKVTVE+Q+YHKSCFKCSHGGCSL
Sbjct: 91 TRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSL 142
Score = 93.6 bits (231), Expect(2) = 3e-44
Identities = 44/46 (95%), Positives = 44/46 (95%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKSASMKR 347
SHGGCSLSPSNYAALDGIL CK HFSQLFKEKGSYNHLIKSASMKR
Sbjct: 136 SHGGCSLSPSNYAALDGILXCKHHFSQLFKEKGSYNHLIKSASMKR 181
Score = 57.0 bits (136), Expect(2) = 5e-16
Identities = 21/37 (56%), Positives = 28/37 (75%)
Frame = +2
Query: 32 FSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSH 142
F GTQ KC C KT YP+++++ + S+HKSCFKCSH
Sbjct: 3 FIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSH 39
Score = 52.0 bits (123), Expect(2) = 5e-16
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYN 317
SH +L SNY+++DG+LYCKPHF QLFKE G+++
Sbjct: 38 SHCKGTLKLSNYSSMDGVLYCKPHFEQLFKETGNFS 73
>ref|XP_002530411.1| Pollen-specific protein SF3, putative [Ricinus communis]
gi|223530060|gb|EEF31981.1| Pollen-specific protein SF3,
putative [Ricinus communis]
Length = 189
Score = 109 bits (272), Expect(2) = 4e-44
Identities = 48/52 (92%), Positives = 52/52 (100%)
Frame = +2
Query: 2 TRSPSKAASMFSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSHGGCSL 157
TRSPSKAASMFSGTQ+KCATCGKTAYPLEKVTVE+Q+YHKSCFKCSHGGCS+
Sbjct: 91 TRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSI 142
Score = 94.0 bits (232), Expect(2) = 4e-44
Identities = 42/46 (91%), Positives = 45/46 (97%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKSASMKR 347
SHGGCS+SPSNYAAL+G+LYCK HFSQLFKEKGSYNHLIKSASMKR
Sbjct: 136 SHGGCSISPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKSASMKR 181
Score = 55.5 bits (132), Expect(2) = 6e-15
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 32 FSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSH 142
F+GTQ KC C KT YP+E ++ + YHKSCFKC H
Sbjct: 3 FTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFH 39
Score = 50.1 bits (118), Expect(2) = 6e-15
Identities = 19/36 (52%), Positives = 29/36 (80%)
Frame = +3
Query: 225 SLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKS 332
+L SNY++++G++YCKPHF QLFKE G++N +S
Sbjct: 43 TLKLSNYSSMEGVVYCKPHFEQLFKETGNFNKNFQS 78
>gb|ACX47456.1| LIM1 [Hevea brasiliensis]
Length = 189
Score = 110 bits (274), Expect(2) = 6e-44
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +2
Query: 2 TRSPSKAASMFSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSHGGCSL 157
TRSPSKAASMFSGTQ+KCATCGKTAYPLEKVTVE+Q+YHKSCFKCSHGGCSL
Sbjct: 91 TRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSL 142
Score = 92.8 bits (229), Expect(2) = 6e-44
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +3
Query: 210 SHGGCSLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKSASMKR 347
SHGGCSLSPSNYAAL+G+LYCK HFSQLFKEKGSYNHLIK ASMKR
Sbjct: 136 SHGGCSLSPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKCASMKR 181
Score = 55.5 bits (132), Expect(2) = 3e-15
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 32 FSGTQDKCATCGKTAYPLEKVTVENQSYHKSCFKCSH 142
F+GTQ KC C KT YP+E ++ + YHKSCFKC H
Sbjct: 3 FTGTQQKCKACEKTVYPMELLSADGVPYHKSCFKCFH 39
Score = 51.2 bits (121), Expect(2) = 3e-15
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = +3
Query: 225 SLSPSNYAALDGILYCKPHFSQLFKEKGSYNHLIKS 332
+L SNY++++G+LYCKPHF QLFKE G++N +S
Sbjct: 43 TLKLSNYSSMEGVLYCKPHFEQLFKETGNFNKNFQS 78