BLASTX nr result

ID: Cephaelis21_contig00016543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016543
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like...   204   3e-50
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu...   162   9e-38
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali...   161   2e-37
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp....   160   3e-37
gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN409...   118   2e-24

>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
          Length = 244

 Score =  204 bits (518), Expect = 3e-50
 Identities = 115/250 (46%), Positives = 159/250 (63%), Gaps = 7/250 (2%)
 Frame = +1

Query: 118 HSRRILVPVEDEALQSSDLS-PDPIFTGPVN--GSSETNIKTNSRLQRPTPFDSSMALTI 288
           H+R++L+   D+A     L+ P   F+GP+N   SS +  K +   Q  TPFDSSMALT+
Sbjct: 4   HTRKLLL---DDAGHGGTLAYPPGPFSGPINPSSSSTSGFKRSLNRQPNTPFDSSMALTV 60

Query: 289 LVLLSALFFMGFFSIYIRRFTEEDSSGVXXXXX-PYWPTTTSGGLPSNQKSGGVDSSTIK 465
           +VLL+ALFFMGFFS+YIRRF E+++  +      P  P ++S   P+  K  G+D+ST+ 
Sbjct: 61  IVLLTALFFMGFFSVYIRRFAEDNAVEMSRRRRHPNPPASSSSRSPTPSK--GLDASTVS 118

Query: 466 ALPLVSYCGGAKQLITDCSICLSEFEEGEIVKLIPHCRHVFHTQCLDTWLSSHASCPLCR 645
           +LPL SY G AK+ + DC +CL++FE+ + VK+IP+CRHVFH  C+DTWLSSH SCP+CR
Sbjct: 119 SLPLFSYHGDAKETL-DCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLSSHVSCPVCR 177

Query: 646 GTQLFKVADDDEVRLDVKEEEDSNGGNEPGGRSTVLDRDTW---RGEGMRRACSCTSLGN 816
            TQLF   D    R  V +E    GG++   R T  D DT+       +RR  SC+SLG 
Sbjct: 178 STQLFPAKDG---RCSVVQEGSDEGGSQSHERLTADDGDTYVEVESLAVRRTTSCSSLGE 234

Query: 817 NPVLQRSMSF 846
             +L R+ SF
Sbjct: 235 RALLHRTSSF 244


>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
           gi|223537045|gb|EEF38681.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  162 bits (410), Expect = 9e-38
 Identities = 92/211 (43%), Positives = 122/211 (57%), Gaps = 16/211 (7%)
 Frame = +1

Query: 259 PFDSSMALTILVLLSALFFMGFFSIYIRRFTEEDSSGVXXXXXPYWPTTTSGGLPSNQKS 438
           PFDSSMALT+LVLLSALFFMGFFSIYIRRF+ E +S          P T S   PS    
Sbjct: 45  PFDSSMALTVLVLLSALFFMGFFSIYIRRFSTEPASEFTSHHPG--PGTPSNQRPSRVVG 102

Query: 439 G---GVDSSTIKALPLVSYCGGAKQLITDCSICLSEFEEGEIVKLIPHCRHVFHTQCLDT 609
           G   G+D   IK+LP+ SY  G  +   +C++CL EFEE E VK IP+C+H+FH +C++T
Sbjct: 103 GSRKGLDPEVIKSLPVYSYYHGEAKYQIECAVCLGEFEEKETVKSIPYCKHMFHLECIET 162

Query: 610 WLSSHASCPLCRGTQLFKVADDD----------EVRLDVKEEEDSNGGNEPGGRSTVLDR 759
           WL  H +CP+CRGTQ  +V   D          +  + ++ ++  N   +  GRS V D 
Sbjct: 163 WLKLHVTCPVCRGTQFLEVKSRDGDGGDGGGGSDKVVRIRVDDGGNSSQQDQGRSMVGDA 222

Query: 760 DT---WRGEGMRRACSCTSLGNNPVLQRSMS 843
           DT       G  R  +C+SLG   +L  + S
Sbjct: 223 DTGIELGTLGTGRTGNCSSLGERILLSETSS 253


>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
           gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName:
           Full=RING-H2 finger protein ATL57
           gi|4510422|gb|AAD21508.1| putative RING zinc finger
           protein [Arabidopsis thaliana]
           gi|26452105|dbj|BAC43142.1| putative RING finger protein
           [Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
           At2g27940 [Arabidopsis thaliana]
           gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
           [Arabidopsis thaliana]
          Length = 237

 Score =  161 bits (408), Expect = 2e-37
 Identities = 93/212 (43%), Positives = 117/212 (55%), Gaps = 13/212 (6%)
 Frame = +1

Query: 247 QRPTPFDSSMALTILVLLSALFFMGFFSIYIRRFTEEDSSGVXXXXXPYWPTTTSGGLPS 426
           Q P+  DS+MALTI +LL ALFFMGFFS+Y R F +  SS V     P   T +S   P 
Sbjct: 41  QPPSALDSTMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPR--TRSSRMSPR 98

Query: 427 NQKSG-----------GVDSSTIKALPLVSYCGGAKQLITDCSICLSEFEEGEIVKLIPH 573
              +            G+DS  +++LP+  Y   AKQ   DC ICLS+FEEGE VK+IPH
Sbjct: 99  RLSTSVVVSRPYSFRRGLDSQAVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPH 158

Query: 574 CRHVFHTQCLDTWLSSHASCPLCRGTQLFKVADDDEVRLDVKEEEDSNGGNEPGGRSTVL 753
           C HVFH  C+DTWLSS+ +CPLCR  QLF   D               G  EP  + +  
Sbjct: 159 CGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD--------------LGMQEPPDQDSAE 204

Query: 754 DRDTWRGEG--MRRACSCTSLGNNPVLQRSMS 843
           + DT  G    +RR  SC+SLG    L+RS+S
Sbjct: 205 EHDTCDGVDTCVRRCSSCSSLGQRTGLERSLS 236


>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326798|gb|EFH57218.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 234

 Score =  160 bits (406), Expect = 3e-37
 Identities = 97/225 (43%), Positives = 124/225 (55%), Gaps = 17/225 (7%)
 Frame = +1

Query: 220 TNIKTNSRLQRPTP-----FDSSMALTILVLLSALFFMGFFSIYIRRFTEEDSSGVXXXX 384
           TN++  + L  P P      DSSMALTI VLL ALFFMGFFS+YI  F ++ +  +    
Sbjct: 26  TNVQNATSLPPPPPEPPSALDSSMALTIFVLLVALFFMGFFSVYIHHFVDDSTVEISSI- 84

Query: 385 XPYWPTTTSGGLPSNQKSG------------GVDSSTIKALPLVSYCGGAKQLITDCSIC 528
               P T S  +   + S             G+DS T+++LP+  Y    KQ   DC IC
Sbjct: 85  ----PRTRSSRMSPRRLSTSVVVSRPYSYRRGLDSQTVRSLPVYHYTKATKQRNEDCVIC 140

Query: 529 LSEFEEGEIVKLIPHCRHVFHTQCLDTWLSSHASCPLCRGTQLFKVADDDEVRLDVKEEE 708
           LSEFEEGE VK+IPHC HVFH  C+DTWLSS+ +CPLCR  QLF   D     L ++E  
Sbjct: 141 LSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSNQLFSDKD-----LGMQEPP 195

Query: 709 DSNGGNEPGGRSTVLDRDTWRGEGMRRACSCTSLGNNPVLQRSMS 843
           D  G +E      V+D        +RR  SC+SLG    L+RS+S
Sbjct: 196 D-QGSSEEHDTCDVVD------PCVRRCSSCSSLGQRTGLERSLS 233


>gb|ABR18008.1| unknown [Picea sitchensis] gi|224286448|gb|ACN40931.1| unknown
           [Picea sitchensis]
          Length = 385

 Score =  118 bits (296), Expect = 2e-24
 Identities = 76/210 (36%), Positives = 110/210 (52%), Gaps = 21/210 (10%)
 Frame = +1

Query: 115 MHSRRILVPVEDEALQSSDL-----SPDPIFTGPVNGSSETNIKTNSRLQRPTP------ 261
           M SRR L P+       SDL     S +  F+ P +    ++ +T   +  P+       
Sbjct: 1   MKSRR-LAPLNSSNDGGSDLFLTGNSGNLSFSSPFSAMGLSDNRTGVNISSPSNNNHDLF 59

Query: 262 -----FDSSMALTILVLLSALFFMGFFSIYIRRFTEEDSSGVXXXXXPYWPTTTSGGLPS 426
                F+ S+A+ I+VLLSALF +GFFSIY RR T+ED S       P        G   
Sbjct: 60  GFNGHFNPSLAIIIIVLLSALFMVGFFSIYFRRRTDEDDSMRRSRRRPRG--VIPQGWWE 117

Query: 427 NQKSGGVDSSTIKALPLVSY--CGGAK---QLITDCSICLSEFEEGEIVKLIPHCRHVFH 591
           +  +GG+D   I++ P+ SY    G K   +   +C +CLS+FE+ E+++L+P C H FH
Sbjct: 118 DDSTGGLDRDVIESFPVFSYDLVKGLKAQTKETLECPVCLSQFEDDELLRLLPKCSHAFH 177

Query: 592 TQCLDTWLSSHASCPLCRGTQLFKVADDDE 681
             C+DTWL SH +CP+CR   +  V  DDE
Sbjct: 178 PDCIDTWLFSHTTCPICR---IILVPTDDE 204


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