BLASTX nr result

ID: Cephaelis21_contig00016040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00016040
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    93   1e-16
emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]    80   5e-13
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    75   2e-11
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    75   2e-11
emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana] gi|7...    73   1e-10

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 47/123 (38%), Positives = 77/123 (62%), Gaps = 1/123 (0%)
 Frame = +2

Query: 515 KAIVWNIRGAGSPRFPNILREFVRLHHPDLIILVETRLSGRKADKVIRKLEFCSSHRVEA 694
           K +VWN++G G+     ILRE +R+++P ++ LVET +SG +A ++  ++ F    RVEA
Sbjct: 4   KIMVWNVQGVGTKL--TILRELMRINNPTVLALVETHISGDQAQRICDRIGFSGQTRVEA 61

Query: 695 RGFAGGIWVLWK-DTIDVVVLLNHAQFIHMEVQPKSSKKSFLLTAIYGSPQRKTRAELWK 871
            GF GGIW+ WK + + V    +H+Q + +E++ +     +L +AIY SP    R ELW+
Sbjct: 62  EGFRGGIWLFWKSEEVTVTPYGSHSQHLTVEIR-RIGDDPWLFSAIYASPDSTLRKELWR 120

Query: 872 CLK 880
            L+
Sbjct: 121 ELE 123


>emb|CAN60544.1| hypothetical protein VITISV_006250 [Vitis vinifera]
          Length = 833

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 35/106 (33%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
 Frame = +2

Query: 515 KAIVWNIRGAGSPRFPNILREFVRLHHPDLIILVETRLSGRKADKVIRKLEFCSSHRVEA 694
           K + WN RGAG  +F   +++ ++LH P +++L+E ++SG  AD+VI+++ F   + ++ 
Sbjct: 668 KLLCWNCRGAGELKFMRAIKDLIKLHEPSIVVLLEPKISGGDADQVIKEIGFSGQYHIDP 727

Query: 695 RGFAGGIWVLWK-DTIDVVVLLNHAQFIHMEVQPKSSKKSFLLTAI 829
            GFA GIW+LW+ + +   V  +    IH+ VQ  S     +L  +
Sbjct: 728 EGFAHGIWILWQTEDVRAEVTSSTPHQIHLSVQVLSEAFDGMLCGV 773


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
 Frame = +2

Query: 521 IVWNIRGAGSPRFPNILREFVRLHHPDLIILVETRLSGRKADKVIRKLEFCSSHRVEARG 700
           ++WN RGA  P F   +R  ++  + D++ L ET   G +  +  + L F +S RV+  G
Sbjct: 4   LLWNCRGANKPNFRCSIRYILKKFNTDILALFETHAGGDREQRSCQGLGFENSFRVDVVG 63

Query: 701 FAGGIWVLWKDTIDVVVLLN-HAQFIHMEVQPKSSKKSFLLTAIYGSPQRKTRAELWKCL 877
            +GG+W+LWK  +  V ++N  +QFIH  +   +  ++  L  +Y +P    R+ LW+ L
Sbjct: 64  QSGGLWLLWKAEVGEVTIVNSSSQFIHARI--VNGVEALHLVTVYAAPSASRRSGLWEKL 121

Query: 878 K 880
           +
Sbjct: 122 R 122


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = +2

Query: 515 KAIVWNIRGAGSPRFPNILREFVRLHHPDLIILVETRLSGRKADKVIRKLEFCSSHRVEA 694
           KAI+WN+RGA S  F     + V++H PDL+IL+ET+ S  +AD+  ++L + +   + A
Sbjct: 2   KAIIWNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIPA 61

Query: 695 RGFAGGIWVLWKDTIDVVVLLNH-AQFIHMEVQPKSSKKSFLLTAIYGSPQRKTRAELW 868
            G  GGIW++WK  I +V   ++     H   + +S     LLT ++       R + W
Sbjct: 62  FGKRGGIWLMWKADIALVHYADYQPNHFHALFKLRSDIPEVLLTGMHAPSVVSERNKYW 120


>emb|CAB10338.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268308|emb|CAB78602.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 655

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 36/121 (29%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
 Frame = +2

Query: 521 IVWNIRGAGSPRFPNILREFVRLHHPDLIILVETRLSGRKADKVIRKLEFCSSHRVEARG 700
           ++WN RG   P F   +R  ++    D++ L ET   G +A ++ ++L F +  RV+A G
Sbjct: 511 LLWNCRGPNKPIFRRSIRYVLKKFDTDVLALFETHAGGDRAGRICQRLGFENQFRVDAVG 570

Query: 701 FAGGIWVLWKDTI-DVVVLLNHAQFIHMEVQPKSSKKSFLLTAIYGSPQRKTRAELWKCL 877
            + G+W+LW+ ++ +V ++ + +QFIH ++   +  +S  L  +Y +P    R+ LW  L
Sbjct: 571 QSSGLWLLWRSSVGNVEIVSSTSQFIHAKI--LTGLESVHLVVVYAAPSVSRRSGLWNEL 628

Query: 878 K 880
           +
Sbjct: 629 R 629


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