BLASTX nr result

ID: Cephaelis21_contig00014959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014959
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB84584.1| transcription factor LIM [Nicotiana tabacum]          274   3e-71
gb|AAD56948.1|AF184109_1 LIM domain protein WLIM1 [Nicotiana tab...   271   2e-70
ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Viti...   271   2e-70
gb|AFV60741.1| LIM domain protein LIM-2 [Gossypium hirsutum]          268   1e-69
dbj|BAA82827.1| transcription factor Ntlim1 [Nicotiana tabacum]       268   2e-69

>dbj|BAB84584.1| transcription factor LIM [Nicotiana tabacum]
          Length = 193

 Score =  274 bits (701), Expect = 3e-71
 Identities = 126/150 (84%), Positives = 135/150 (90%)
 Frame = +2

Query: 515 LQLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKLAKPDKLVDIEKPLANKVSSMF 694
           L+LGNYNSFEGVLYCRPHFDQLFK+TGSLDKSFEGTPK+ KP K +D EKP   KV+SMF
Sbjct: 44  LKLGNYNSFEGVLYCRPHFDQLFKQTGSLDKSFEGTPKIVKPQKPIDSEKPQVAKVTSMF 103

Query: 695 VGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI 874
            GTR+KCFGC KTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI
Sbjct: 104 GGTREKCFGCKKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI 163

Query: 875 QLIKEKGNLSQLEGDHEKSSAGATHVASES 964
           QLIKEKGNLS+LEGDHE +S   T V +ES
Sbjct: 164 QLIKEKGNLSKLEGDHEMNSTTTTEVTAES 193



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 37/101 (36%), Positives = 51/101 (50%)
 Frame = +2

Query: 692 FVGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHH 871
           F GT  KC  C KTVY  +K + +   YHK+CF+C H    +   NY + EG LYC+ H 
Sbjct: 3   FAGTTQKCMACDKTVYLVDKFTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHF 62

Query: 872 IQLIKEKGNLSQLEGDHEKSSAGATHVASES*LPRAPAEKE 994
            QL K+ G+L       +KS  G   +      P+ P + E
Sbjct: 63  DQLFKQTGSL-------DKSFEGTPKIVK----PQKPIDSE 92


>gb|AAD56948.1|AF184109_1 LIM domain protein WLIM1 [Nicotiana tabacum]
          Length = 193

 Score =  271 bits (694), Expect = 2e-70
 Identities = 125/150 (83%), Positives = 134/150 (89%)
 Frame = +2

Query: 515 LQLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKLAKPDKLVDIEKPLANKVSSMF 694
           L+LGNYNSFEGVLYCRPHFDQLFK+TGSLDKSFEGTPK+ KP K +D  KP   KV+SMF
Sbjct: 44  LKLGNYNSFEGVLYCRPHFDQLFKQTGSLDKSFEGTPKIVKPQKPIDSGKPQVAKVTSMF 103

Query: 695 VGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI 874
            GTR+KCFGC KTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI
Sbjct: 104 GGTREKCFGCKKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI 163

Query: 875 QLIKEKGNLSQLEGDHEKSSAGATHVASES 964
           QLIKEKGNLS+LEGDHE +S   T V +ES
Sbjct: 164 QLIKEKGNLSKLEGDHEMNSTTTTEVTAES 193



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = +2

Query: 692 FVGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHH 871
           F GT  KC  C KT Y  +K++ +   YHK+CF+C H    +   NY + EG LYC+ H 
Sbjct: 3   FAGTTQKCMACDKTAYLVDKLTADNRIYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHF 62

Query: 872 IQLIKEKGNLSQ 907
            QL K+ G+L +
Sbjct: 63  DQLFKQTGSLDK 74


>ref|XP_002285355.1| PREDICTED: pollen-specific protein SF3 [Vitis vinifera]
           gi|147785329|emb|CAN72849.1| hypothetical protein
           VITISV_013939 [Vitis vinifera]
           gi|302142193|emb|CBI19396.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score =  271 bits (693), Expect = 2e-70
 Identities = 126/154 (81%), Positives = 135/154 (87%), Gaps = 4/154 (2%)
 Frame = +2

Query: 515 LQLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKLAKPDKLVDIEKPLANKVSSMF 694
           L+LGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPK+ KP+K +D EKP+ANKVSSMF
Sbjct: 44  LKLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKIVKPEKPIDSEKPIANKVSSMF 103

Query: 695 VGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI 874
            GTRDKC GC  TVYPTEKV+VNGT YHKSCFKC+HGGC ISPSNYIAHEGRLYCKHHH 
Sbjct: 104 AGTRDKCVGCKNTVYPTEKVTVNGTAYHKSCFKCTHGGCTISPSNYIAHEGRLYCKHHHT 163

Query: 875 QLIKEKGNLSQLEGDHEKSSA----GATHVASES 964
           QLIKEKGNLSQLEGDHEK +A        VA+ES
Sbjct: 164 QLIKEKGNLSQLEGDHEKDTANEKVNGREVAAES 197



 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 31/72 (43%), Positives = 42/72 (58%)
 Frame = +2

Query: 692 FVGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHH 871
           F GT  KC  C KTVY  +K++ +   YHK+CF+C H    +   NY + EG LYC+ H 
Sbjct: 3   FAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHF 62

Query: 872 IQLIKEKGNLSQ 907
            QL K  G+L +
Sbjct: 63  DQLFKRTGSLDK 74


>gb|AFV60741.1| LIM domain protein LIM-2 [Gossypium hirsutum]
          Length = 190

 Score =  268 bits (686), Expect = 1e-69
 Identities = 126/150 (84%), Positives = 135/150 (90%)
 Frame = +2

Query: 515 LQLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKLAKPDKLVDIEKPLANKVSSMF 694
           L+LGNYNSFEGVLYCRPHFDQLFKRTGSL+KSFEGTPK+AKP+K VD EKP+A KVS MF
Sbjct: 44  LKLGNYNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIAKPEKPVDGEKPIATKVSGMF 103

Query: 695 VGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI 874
            GTRDKCFGC  TVYPTE+V+VNGTPYHKSCFKC+HGGCVISPSNYIAHEGRLYCKHHH 
Sbjct: 104 GGTRDKCFGCKNTVYPTERVTVNGTPYHKSCFKCTHGGCVISPSNYIAHEGRLYCKHHHG 163

Query: 875 QLIKEKGNLSQLEGDHEKSSAGATHVASES 964
           QLIKEKGNLSQLEGD EK     T VA+ES
Sbjct: 164 QLIKEKGNLSQLEGDREKD---GTEVAAES 190



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 39/101 (38%), Positives = 51/101 (50%)
 Frame = +2

Query: 692 FVGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHH 871
           F GT  KC  C KTVY  +K++ +   YHK+CF+C H    +   NY + EG LYC+ H 
Sbjct: 3   FAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLGNYNSFEGVLYCRPHF 62

Query: 872 IQLIKEKGNLSQLEGDHEKSSAGATHVASES*LPRAPAEKE 994
            QL K  G+L       EKS  G   +A     P  P + E
Sbjct: 63  DQLFKRTGSL-------EKSFEGTPKIAK----PEKPVDGE 92


>dbj|BAA82827.1| transcription factor Ntlim1 [Nicotiana tabacum]
          Length = 200

 Score =  268 bits (685), Expect = 2e-69
 Identities = 122/150 (81%), Positives = 133/150 (88%)
 Frame = +2

Query: 515 LQLGNYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKLAKPDKLVDIEKPLANKVSSMF 694
           ++LGNYNSFEGVLYCRPHFDQLFK+TGSLDKSFEGTPK+ KP K +D EKP   KV+SMF
Sbjct: 44  VKLGNYNSFEGVLYCRPHFDQLFKQTGSLDKSFEGTPKIVKPQKPIDSEKPQVAKVTSMF 103

Query: 695 VGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHHI 874
            GTR+KCFGC KTVYPTEKVS NGTPYHKSCF+CSHGGCVISPSNY AHEGRLYCKHHHI
Sbjct: 104 GGTREKCFGCKKTVYPTEKVSANGTPYHKSCFQCSHGGCVISPSNYTAHEGRLYCKHHHI 163

Query: 875 QLIKEKGNLSQLEGDHEKSSAGATHVASES 964
           QLIKEKGNLS+LEGDHE +S   T V +ES
Sbjct: 164 QLIKEKGNLSKLEGDHEMNSTTTTEVTAES 193



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 37/101 (36%), Positives = 52/101 (51%)
 Frame = +2

Query: 692 FVGTRDKCFGCSKTVYPTEKVSVNGTPYHKSCFKCSHGGCVISPSNYIAHEGRLYCKHHH 871
           F GT  KC  C KTVY  +K++ +   YHK+CF+C H    +   NY + EG LYC+ H 
Sbjct: 3   FAGTTQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCKGTVKLGNYNSFEGVLYCRPHF 62

Query: 872 IQLIKEKGNLSQLEGDHEKSSAGATHVASES*LPRAPAEKE 994
            QL K+ G+L       +KS  G   +      P+ P + E
Sbjct: 63  DQLFKQTGSL-------DKSFEGTPKIVK----PQKPIDSE 92


Top