BLASTX nr result

ID: Cephaelis21_contig00014893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014893
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]              95   6e-18
gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]                    93   3e-17
ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana] gi|...    92   6e-17
gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]        92   6e-17
gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]        92   6e-17

>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 49/59 (83%), Positives = 53/59 (89%)
 Frame = +2

Query: 350 YQLEAFDIANKRNTIVFLETGSGKTLIAIMLLRSYAYKIRKPAPCIAVFLVPTVVLVNQ 526
           YQLEA + A KRNTIV+LETGSGKTLIAIMLLRSYAY +RKP+P IAVFLVPTVVLV Q
Sbjct: 25  YQLEALETALKRNTIVYLETGSGKTLIAIMLLRSYAYLLRKPSPYIAVFLVPTVVLVAQ 83


>gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
          Length = 1392

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = +2

Query: 350 YQLEAFDIANKRNTIVFLETGSGKTLIAIMLLRSYAYKIRKPAPCIAVFLVPTVVLVNQ 526
           YQ+EA + A KRNTIV+LETGSGKTLIAIMLLRSYAY  RKP+PC +VFLVP VVLV Q
Sbjct: 26  YQVEALEKAMKRNTIVYLETGSGKTLIAIMLLRSYAYLFRKPSPCFSVFLVPQVVLVTQ 84


>ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
           gi|334185051|ref|NP_001189798.1| protein dicer-like 2
           [Arabidopsis thaliana]
           gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName:
           Full=Endoribonuclease Dicer homolog 2; AltName:
           Full=Dicer-like protein 2; Short=AtDCL2
           gi|332640403|gb|AEE73924.1| protein dicer-like 2
           [Arabidopsis thaliana] gi|332640405|gb|AEE73926.1|
           protein dicer-like 2 [Arabidopsis thaliana]
          Length = 1388

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +2

Query: 350 YQLEAFDIANKRNTIVFLETGSGKTLIAIMLLRSYAYKIRKPAPCIAVFLVPTVVLVNQ 526
           YQ+EA + A K+NTIVFLETGSGKTLIAIMLLRSYAY  RKP+PC  VFLVP VVLV Q
Sbjct: 27  YQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQVVLVTQ 85


>gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
          Length = 1386

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +2

Query: 350 YQLEAFDIANKRNTIVFLETGSGKTLIAIMLLRSYAYKIRKPAPCIAVFLVPTVVLVNQ 526
           YQ+EA + A K+NTIVFLETGSGKTLIAIMLLRSYAY  RKP+PC  VFLVP VVLV Q
Sbjct: 25  YQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQVVLVTQ 83


>gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
          Length = 2042

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 46/59 (77%), Positives = 50/59 (84%)
 Frame = +2

Query: 350 YQLEAFDIANKRNTIVFLETGSGKTLIAIMLLRSYAYKIRKPAPCIAVFLVPTVVLVNQ 526
           YQ+EA + A K+NTIVFLETGSGKTLIAIMLLRSYAY  RKP+PC  VFLVP VVLV Q
Sbjct: 753 YQVEALEKAIKQNTIVFLETGSGKTLIAIMLLRSYAYLFRKPSPCFCVFLVPQVVLVTQ 811


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