BLASTX nr result

ID: Cephaelis21_contig00014815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014815
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK95390.1| ribosomal protein L2 [Solanum lycopersicum]            211   3e-56
ref|XP_004147352.1| PREDICTED: 60S ribosomal protein L2, mitocho...   178   1e-49
emb|CBI24728.3| unnamed protein product [Vitis vinifera]              173   3e-46
gb|AAK95391.1| ribosomal protein L2 [Gossypium arboreum]              172   2e-45
ref|XP_003548254.1| PREDICTED: 60S ribosomal protein L2, mitocho...   174   4e-44

>gb|AAK95390.1| ribosomal protein L2 [Solanum lycopersicum]
          Length = 202

 Score =  211 bits (536), Expect(2) = 3e-56
 Identities = 110/171 (64%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
 Frame = -3

Query: 711 MELSRAPMASLPLLRNSTH-PFSLGAIQAMNPNWVPARPTKTMKNSFRMDNRSQIGSCMP 535
           M L RA MAS  LLRN  +  FS    +AM     P++  ++M   F +D  SQIGSCMP
Sbjct: 1   MALCRARMASSFLLRNVINRSFSTSPFEAMISKMKPSKELESMMEQFSLDISSQIGSCMP 60

Query: 534 LSMMRIGTLIHHIELRPGQGPKLVRSSGTVAKILSETGSLSRRCQIKLPSGEKKLIDTRC 355
           L MMRIGTLIH+IELRPGQG KLVRS+GT AKIL+E  + ++ C++KLPSG KKLID +C
Sbjct: 61  LGMMRIGTLIHNIELRPGQGGKLVRSAGTCAKILTEPNASTKYCEVKLPSGVKKLIDVKC 120

Query: 354 RAIIGQMSNAEQRKKKLRKAGQSRWLGIRPKVRGVAMNAVDHPHGGGEGKS 202
           RA IGQ+SN E   KKLRKAGQSRWLG RP VRGVAMN VDHPHGGGEG+S
Sbjct: 121 RATIGQVSNPEHGTKKLRKAGQSRWLGRRPTVRGVAMNPVDHPHGGGEGRS 171



 Score = 34.3 bits (77), Expect(2) = 3e-56
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = -2

Query: 133 GGEGKSNSAVSHGRRRWPLGRKPIKCGYKT 44
           GGEG+S S+ SHGR       KP K GYKT
Sbjct: 166 GGEGRSKSSGSHGRGSLTPWGKPTKGGYKT 195


>ref|XP_004147352.1| PREDICTED: 60S ribosomal protein L2, mitochondrial-like [Cucumis
           sativus] gi|449530285|ref|XP_004172126.1| PREDICTED: 60S
           ribosomal protein L2, mitochondrial-like [Cucumis
           sativus]
          Length = 216

 Score =  178 bits (451), Expect(2) = 1e-49
 Identities = 88/123 (71%), Positives = 99/123 (80%)
 Frame = -3

Query: 570 MDNRSQIGSCMPLSMMRIGTLIHHIELRPGQGPKLVRSSGTVAKILSETGSLSRRCQIKL 391
           +D  SQIGSCMPL +MRIGT+IH+IE+ PGQG KLVRS+GT A+IL      SR C +KL
Sbjct: 61  LDINSQIGSCMPLGLMRIGTIIHNIEINPGQGGKLVRSAGTSARILKLPEGKSRCCLVKL 120

Query: 390 PSGEKKLIDTRCRAIIGQMSNAEQRKKKLRKAGQSRWLGIRPKVRGVAMNAVDHPHGGGE 211
           PS E+KLID +CRA IGQ+SN     KKLRKAGQSRWLG RPKVRGVAMN VDHPHGGGE
Sbjct: 121 PSREEKLIDAKCRATIGQVSNPGHGTKKLRKAGQSRWLGRRPKVRGVAMNPVDHPHGGGE 180

Query: 210 GKS 202
           GKS
Sbjct: 181 GKS 183



 Score = 45.4 bits (106), Expect(2) = 1e-49
 Identities = 24/40 (60%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = -2

Query: 133 GGEGKSNSAVSHGR-RRWPLGRKPIKCGYKTKSPKEQNNI 17
           GGEGKS S+ SHGR  R P G KP KCGYKT+S K +  +
Sbjct: 178 GGEGKSKSSGSHGRGSRTPWG-KPTKCGYKTRSAKRKRPV 216


>emb|CBI24728.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  173 bits (439), Expect(2) = 3e-46
 Identities = 98/177 (55%), Positives = 118/177 (66%), Gaps = 7/177 (3%)
 Frame = -3

Query: 711 MELSRAPMASLPLLRNSTHPF-------SLGAIQAMNPNWVPARPTKTMKNSFRMDNRSQ 553
           M L RA  AS  LL+    P        +L ++   +P+   A     M   F +D  SQ
Sbjct: 1   MALVRARAASSTLLKRLLFPSVANPSHRNLSSVAKDSPH--DAFRESMMNQMFSLDINSQ 58

Query: 552 IGSCMPLSMMRIGTLIHHIELRPGQGPKLVRSSGTVAKILSETGSLSRRCQIKLPSGEKK 373
           IGSCMPL+ MRIGT+IH+IE+ PGQG KLVR++GT AK+L E    SR   +++PSG +K
Sbjct: 59  IGSCMPLAAMRIGTIIHNIEINPGQGGKLVRAAGTSAKLLKEP--TSRYVLVRMPSGVQK 116

Query: 372 LIDTRCRAIIGQMSNAEQRKKKLRKAGQSRWLGIRPKVRGVAMNAVDHPHGGGEGKS 202
           LIDTRCRA IG +SN     KKLRKAGQSRWLG RP VRGVAMN VDHPHGGGEG+S
Sbjct: 117 LIDTRCRATIGTVSNPGHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 173



 Score = 38.5 bits (88), Expect(2) = 3e-46
 Identities = 18/30 (60%), Positives = 19/30 (63%)
 Frame = -2

Query: 133 GGEGKSNSAVSHGRRRWPLGRKPIKCGYKT 44
           GGEG+S S  SHGR       KP KCGYKT
Sbjct: 168 GGEGRSKSGGSHGRGSLTPWGKPTKCGYKT 197


>gb|AAK95391.1| ribosomal protein L2 [Gossypium arboreum]
          Length = 191

 Score =  172 bits (436), Expect(2) = 2e-45
 Identities = 86/128 (67%), Positives = 100/128 (78%)
 Frame = -3

Query: 585 KNSFRMDNRSQIGSCMPLSMMRIGTLIHHIELRPGQGPKLVRSSGTVAKILSETGSLSRR 406
           ++   +D  SQIGSCMP++ MRIGT IH+IE+ PGQG KLVR++GT AKIL E  S  R 
Sbjct: 35  RDLLNLDINSQIGSCMPIASMRIGTFIHNIEVNPGQGGKLVRAAGTSAKILKEPKS--RY 92

Query: 405 CQIKLPSGEKKLIDTRCRAIIGQMSNAEQRKKKLRKAGQSRWLGIRPKVRGVAMNAVDHP 226
           C I+LPSG +KLIDTRCRA +G +SN     KKLRKAGQSRWLG RP VRGVAMN VDHP
Sbjct: 93  CLIRLPSGAEKLIDTRCRATVGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHP 152

Query: 225 HGGGEGKS 202
           HGGGEG+S
Sbjct: 153 HGGGEGRS 160



 Score = 37.0 bits (84), Expect(2) = 2e-45
 Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -2

Query: 133 GGEGKSNSAVSHGR-RRWPLGRKPIKCGYKTKSPKEQN 23
           GGEG+S S+ S+G+  R P G KP KCG+KT   + +N
Sbjct: 155 GGEGRSKSSGSYGKGSRTPWG-KPCKCGFKTAKNRRRN 191


>ref|XP_003548254.1| PREDICTED: 60S ribosomal protein L2, mitochondrial-like [Glycine
           max]
          Length = 195

 Score =  174 bits (441), Expect(2) = 4e-44
 Identities = 96/167 (57%), Positives = 112/167 (67%)
 Frame = -3

Query: 702 SRAPMASLPLLRNSTHPFSLGAIQAMNPNWVPARPTKTMKNSFRMDNRSQIGSCMPLSMM 523
           SR   ++L L  N+   FS  A  +         P  T ++    D  S+IGSCMPLS M
Sbjct: 8   SRTASSALNLFTNALRHFSSEATNSS--------PHSTRESMMYSDINSRIGSCMPLSAM 59

Query: 522 RIGTLIHHIELRPGQGPKLVRSSGTVAKILSETGSLSRRCQIKLPSGEKKLIDTRCRAII 343
           RIGT+IH+IEL PGQG KLVR++GT AKIL E    S  C I+LPSG KKLID+RCRA +
Sbjct: 60  RIGTIIHNIELNPGQGGKLVRAAGTSAKILKEP--TSAYCLIQLPSGVKKLIDSRCRATV 117

Query: 342 GQMSNAEQRKKKLRKAGQSRWLGIRPKVRGVAMNAVDHPHGGGEGKS 202
           G +SN     +KLRKAG SRWLG RP VRGVAMN VDHPHGGGEGKS
Sbjct: 118 GVVSNPSHGDRKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKS 164



 Score = 30.4 bits (67), Expect(2) = 4e-44
 Identities = 16/30 (53%), Positives = 16/30 (53%)
 Frame = -2

Query: 133 GGEGKSNSAVSHGRRRWPLGRKPIKCGYKT 44
           GGEGKS S    GR       KP K GYKT
Sbjct: 159 GGEGKSKSGGRFGRGSLTPWGKPTKSGYKT 188


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