BLASTX nr result
ID: Cephaelis21_contig00014716
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00014716 (254 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN62321.1| hypothetical protein VITISV_018461 [Vitis vinifera] 107 1e-21 ref|XP_003517986.1| PREDICTED: uncharacterized protein LOC100819... 99 5e-19 ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792... 98 6e-19 gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] 97 1e-18 gb|ABG37658.1| integrase [Populus trichocarpa] 91 8e-17 >emb|CAN62321.1| hypothetical protein VITISV_018461 [Vitis vinifera] Length = 623 Score = 107 bits (266), Expect = 1e-21 Identities = 47/83 (56%), Positives = 61/83 (73%) Frame = +3 Query: 3 LSRLVREQDSLSLSEFFPDEQLFHLQDMLPWYADIVNYLVTGSLPSYISKSRKTKLKSEA 182 LSRLV +D L L E F DEQLF LPWYA+ VNYLVT L +SK+ + +KS+A Sbjct: 356 LSRLVHMEDELHLQETFLDEQLFSASVTLPWYANTVNYLVTNMLSPGLSKAERDTIKSDA 415 Query: 183 KYYVWDDPYLWKFCSDQIVRRCV 251 KYYVWDDPYLWK C+++++R+C+ Sbjct: 416 KYYVWDDPYLWKHCANRVIRKCI 438 >ref|XP_003517986.1| PREDICTED: uncharacterized protein LOC100819936 [Glycine max] Length = 1267 Score = 98.6 bits (244), Expect = 5e-19 Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 6/90 (6%) Frame = +3 Query: 3 LSRLVREQDSLS-LSEFFPDEQLFHLQDM-----LPWYADIVNYLVTGSLPSYISKSRKT 164 LSR+ R ++ S + + FPD+ L+ L + PW+A+IVNYLV P SK++K Sbjct: 541 LSRIERVSNAYSPIRDDFPDDHLYILYSISDSLSTPWFANIVNYLVASVFPPLASKAQKD 600 Query: 165 KLKSEAKYYVWDDPYLWKFCSDQIVRRCVP 254 K+KS+AK+++WDDPYLWK CSDQ++RRC+P Sbjct: 601 KIKSDAKHFIWDDPYLWKLCSDQVIRRCIP 630 >ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792198 [Glycine max] Length = 920 Score = 98.2 bits (243), Expect = 6e-19 Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 6/90 (6%) Frame = +3 Query: 3 LSRLVREQDSLS-LSEFFPDEQLFHLQDM-----LPWYADIVNYLVTGSLPSYISKSRKT 164 LSR+ R D+ S + + FPD+ L+ L + PW+A+IVNYLV P SK++K Sbjct: 504 LSRIERVFDADSPIRDDFPDDHLYILYSISDSLSTPWFANIVNYLVASVFPPLASKAQKD 563 Query: 165 KLKSEAKYYVWDDPYLWKFCSDQIVRRCVP 254 K+KS+AK+++WDDPYLWK CSDQ++RRC+P Sbjct: 564 KIKSDAKHFIWDDPYLWKLCSDQVIRRCIP 593 >gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis] Length = 1788 Score = 97.4 bits (241), Expect = 1e-18 Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%) Frame = +3 Query: 3 LSRLVREQDS-LSLSEFFPDEQLFHLQDMLPWYADIVNYLVTGSLPSYISKSRKTKLKSE 179 LSRL S + ++E FPDEQL +Q + PW+ADIVNY+V +PS+ SK +++ S+ Sbjct: 1264 LSRLPNAPTSTVPINEHFPDEQLLEIQSV-PWFADIVNYIVMNQIPSHWSKQDRSRFLSQ 1322 Query: 180 AKYYVWDDPYLWKFCSDQIVRRCVP 254 KY+ WDDPYL+K+C DQI RRCVP Sbjct: 1323 VKYFYWDDPYLFKYCPDQIFRRCVP 1347 >gb|ABG37658.1| integrase [Populus trichocarpa] Length = 1139 Score = 91.3 bits (225), Expect = 8e-17 Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%) Frame = +3 Query: 3 LSRLVREQ--DSLSLSEFFPDEQLFHLQDMLPWYADIVNYLVTGSLPSYISKSRKTKLKS 176 LSRL + D + ++FPDE LF + M PWYA IVN+LV+G LP++ S K K + Sbjct: 757 LSRLTTDSRSDITPIDDYFPDESLFSVSTM-PWYASIVNFLVSGQLPAHWSTQDKRKFLN 815 Query: 177 EAKYYVWDDPYLWKFCSDQIVRRCV 251 E K + WDDPYL+K+C DQI RRC+ Sbjct: 816 EVKNFYWDDPYLFKYCPDQIFRRCI 840