BLASTX nr result

ID: Cephaelis21_contig00014716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014716
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62321.1| hypothetical protein VITISV_018461 [Vitis vinifera]   107   1e-21
ref|XP_003517986.1| PREDICTED: uncharacterized protein LOC100819...    99   5e-19
ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792...    98   6e-19
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]     97   1e-18
gb|ABG37658.1| integrase [Populus trichocarpa]                         91   8e-17

>emb|CAN62321.1| hypothetical protein VITISV_018461 [Vitis vinifera]
          Length = 623

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/83 (56%), Positives = 61/83 (73%)
 Frame = +3

Query: 3   LSRLVREQDSLSLSEFFPDEQLFHLQDMLPWYADIVNYLVTGSLPSYISKSRKTKLKSEA 182
           LSRLV  +D L L E F DEQLF     LPWYA+ VNYLVT  L   +SK+ +  +KS+A
Sbjct: 356 LSRLVHMEDELHLQETFLDEQLFSASVTLPWYANTVNYLVTNMLSPGLSKAERDTIKSDA 415

Query: 183 KYYVWDDPYLWKFCSDQIVRRCV 251
           KYYVWDDPYLWK C+++++R+C+
Sbjct: 416 KYYVWDDPYLWKHCANRVIRKCI 438


>ref|XP_003517986.1| PREDICTED: uncharacterized protein LOC100819936 [Glycine max]
          Length = 1267

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
 Frame = +3

Query: 3   LSRLVREQDSLS-LSEFFPDEQLFHLQDM-----LPWYADIVNYLVTGSLPSYISKSRKT 164
           LSR+ R  ++ S + + FPD+ L+ L  +      PW+A+IVNYLV    P   SK++K 
Sbjct: 541 LSRIERVSNAYSPIRDDFPDDHLYILYSISDSLSTPWFANIVNYLVASVFPPLASKAQKD 600

Query: 165 KLKSEAKYYVWDDPYLWKFCSDQIVRRCVP 254
           K+KS+AK+++WDDPYLWK CSDQ++RRC+P
Sbjct: 601 KIKSDAKHFIWDDPYLWKLCSDQVIRRCIP 630


>ref|XP_003525980.1| PREDICTED: uncharacterized protein LOC100792198 [Glycine max]
          Length = 920

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
 Frame = +3

Query: 3   LSRLVREQDSLS-LSEFFPDEQLFHLQDM-----LPWYADIVNYLVTGSLPSYISKSRKT 164
           LSR+ R  D+ S + + FPD+ L+ L  +      PW+A+IVNYLV    P   SK++K 
Sbjct: 504 LSRIERVFDADSPIRDDFPDDHLYILYSISDSLSTPWFANIVNYLVASVFPPLASKAQKD 563

Query: 165 KLKSEAKYYVWDDPYLWKFCSDQIVRRCVP 254
           K+KS+AK+++WDDPYLWK CSDQ++RRC+P
Sbjct: 564 KIKSDAKHFIWDDPYLWKLCSDQVIRRCIP 593


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3    LSRLVREQDS-LSLSEFFPDEQLFHLQDMLPWYADIVNYLVTGSLPSYISKSRKTKLKSE 179
            LSRL     S + ++E FPDEQL  +Q + PW+ADIVNY+V   +PS+ SK  +++  S+
Sbjct: 1264 LSRLPNAPTSTVPINEHFPDEQLLEIQSV-PWFADIVNYIVMNQIPSHWSKQDRSRFLSQ 1322

Query: 180  AKYYVWDDPYLWKFCSDQIVRRCVP 254
             KY+ WDDPYL+K+C DQI RRCVP
Sbjct: 1323 VKYFYWDDPYLFKYCPDQIFRRCVP 1347


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 43/85 (50%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
 Frame = +3

Query: 3    LSRLVREQ--DSLSLSEFFPDEQLFHLQDMLPWYADIVNYLVTGSLPSYISKSRKTKLKS 176
            LSRL  +   D   + ++FPDE LF +  M PWYA IVN+LV+G LP++ S   K K  +
Sbjct: 757  LSRLTTDSRSDITPIDDYFPDESLFSVSTM-PWYASIVNFLVSGQLPAHWSTQDKRKFLN 815

Query: 177  EAKYYVWDDPYLWKFCSDQIVRRCV 251
            E K + WDDPYL+K+C DQI RRC+
Sbjct: 816  EVKNFYWDDPYLFKYCPDQIFRRCI 840


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