BLASTX nr result

ID: Cephaelis21_contig00014662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014662
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595526.1| Pentatricopeptide repeat-containing protein ...    57   2e-06
gb|AEC33263.1| putative pentatricopeptide protein [Triticum aest...    55   8e-06

>ref|XP_003595526.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484574|gb|AES65777.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 229

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = +2

Query: 95  HARLIKLGLHTNPLYASKLIAEYACLPAPNSLRHAHRVFDQVPSNLRDTALWASLISAYS 274
           HA ++K GLH++    + L+  Y  L     L HA  +FD +  +++D   W SLIS Y+
Sbjct: 73  HAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSL--HVKDVISWTSLISGYT 130

Query: 275 RSEQPNKALHLFSHLLCHP 331
           RS+ P++++ LF  +L  P
Sbjct: 131 RSDLPHQSISLFYEMLAFP 149


>gb|AEC33263.1| putative pentatricopeptide protein [Triticum aestivum]
          Length = 644

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/85 (40%), Positives = 45/85 (52%)
 Frame = +2

Query: 95  HARLIKLGLHTNPLYASKLIAEYACLPAPNSLRHAHRVFDQVPSNLRDTALWASLISAYS 274
           HA  + LGLH +P  A +L+A YA          AH VFD +PS  R T  W +LISAYS
Sbjct: 95  HAHALHLGLHAHPDVAGQLLAAYA---RHGRADEAHHVFDAMPSK-RATMSWNTLISAYS 150

Query: 275 RSEQPNKALHLFSHLLCHPQASQNA 349
               PN A+  F+ +    +A  +A
Sbjct: 151 VCCDPNNAMATFARMAAAGEALPDA 175


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