BLASTX nr result

ID: Cephaelis21_contig00014596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00014596
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300771.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|NP_001190784.1| ribophorin II (RPN2) family protein [Arabido...   120   9e-26
ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsi...   120   9e-26
ref|XP_002529851.1| ribophorin II, putative [Ricinus communis] g...   120   2e-25
ref|XP_002307654.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002300771.1| predicted protein [Populus trichocarpa] gi|222842497|gb|EEE80044.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  129 bits (325), Expect = 2e-28
 Identities = 69/104 (66%), Positives = 83/104 (79%), Gaps = 4/104 (3%)
 Frame = -3

Query: 302 GFLVLLLSIASICE----AANFNPISDSHRPAALELFTPTNGSLQRLEETYEALRTFEIL 135
           GFLVL+++ A IC     ++ F PISDSHR AALELFTP +GS   LEETYEALRTFE+L
Sbjct: 7   GFLVLIVA-ALICSTSFASSIFQPISDSHRSAALELFTPRDGSFFSLEETYEALRTFEVL 65

Query: 134 GIDKESDIKTPTCPTVVDTLWSPSSALKDLFQALRVNGILKCEL 3
           GIDK+SDI T  C +V++ L SPSSALKDLF AL+VNGILKC++
Sbjct: 66  GIDKKSDIDTAACQSVLEILGSPSSALKDLFYALKVNGILKCDI 109


>ref|NP_001190784.1| ribophorin II (RPN2) family protein [Arabidopsis thaliana]
           gi|332659009|gb|AEE84409.1| ribophorin II (RPN2) family
           protein [Arabidopsis thaliana]
          Length = 678

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 NTGFLVLLLSIASICEAAN-FNPISDSHRPAALELFTPTNGSLQRLEETYEALRTFEILG 132
           N  FLVL+L++A IC AA+ F PISDSHR AAL++F P +GS + LEE YEAL+T EILG
Sbjct: 5   NVRFLVLILAVA-ICGAASVFQPISDSHRSAALDVFVPVDGSYKSLEEAYEALKTLEILG 63

Query: 131 IDKESDIKTPTCPTVVDTLWSPSSALKDLFQALRVNGILKCEL 3
           IDK+SD+ + TC  VV  L S SS LKD F AL VNGILKC++
Sbjct: 64  IDKKSDLSSKTCENVVKVLQSSSSTLKDAFYALNVNGILKCKI 106


>ref|NP_193847.2| ribophorin II (RPN2) family protein [Arabidopsis thaliana]
           gi|334186764|ref|NP_001190785.1| ribophorin II (RPN2)
           family protein [Arabidopsis thaliana]
           gi|75163691|sp|Q93Z16.1|RPN2_ARATH RecName:
           Full=Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 2; AltName: Full=Protein
           HAPLESS 6; AltName: Full=Ribophorin II; Short=RPN-II;
           AltName: Full=Ribophorin-2; Flags: Precursor
           gi|16604454|gb|AAL24233.1| AT4g21150/F7J7_90
           [Arabidopsis thaliana] gi|18958022|gb|AAL79584.1|
           AT4g21150/F7J7_90 [Arabidopsis thaliana]
           gi|332659008|gb|AEE84408.1| ribophorin II (RPN2) family
           protein [Arabidopsis thaliana]
           gi|332659010|gb|AEE84410.1| ribophorin II (RPN2) family
           protein [Arabidopsis thaliana]
          Length = 691

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/103 (62%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = -3

Query: 308 NTGFLVLLLSIASICEAAN-FNPISDSHRPAALELFTPTNGSLQRLEETYEALRTFEILG 132
           N  FLVL+L++A IC AA+ F PISDSHR AAL++F P +GS + LEE YEAL+T EILG
Sbjct: 6   NVRFLVLILAVA-ICGAASVFQPISDSHRSAALDVFVPVDGSYKSLEEAYEALKTLEILG 64

Query: 131 IDKESDIKTPTCPTVVDTLWSPSSALKDLFQALRVNGILKCEL 3
           IDK+SD+ + TC  VV  L S SS LKD F AL VNGILKC++
Sbjct: 65  IDKKSDLSSKTCENVVKVLQSSSSTLKDAFYALNVNGILKCKI 107


>ref|XP_002529851.1| ribophorin II, putative [Ricinus communis]
           gi|223530679|gb|EEF32552.1| ribophorin II, putative
           [Ricinus communis]
          Length = 699

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/103 (61%), Positives = 78/103 (75%), Gaps = 3/103 (2%)
 Frame = -3

Query: 302 GFLVLLLS--IASICEAANFN-PISDSHRPAALELFTPTNGSLQRLEETYEALRTFEILG 132
           GFLVLL+   I S+  +A+ + PISDSHR AALELFTP  GS   LEE YEALRTFE+LG
Sbjct: 8   GFLVLLVVALICSVSSSASISYPISDSHRSAALELFTPIGGSFGSLEEAYEALRTFEVLG 67

Query: 131 IDKESDIKTPTCPTVVDTLWSPSSALKDLFQALRVNGILKCEL 3
           IDK+ DI  P C ++++TL S S+  KD+F AL+VNGILKCE+
Sbjct: 68  IDKKPDISVPACHSILETLGSSSAVSKDIFYALKVNGILKCEV 110


>ref|XP_002307654.1| predicted protein [Populus trichocarpa] gi|222857103|gb|EEE94650.1|
           predicted protein [Populus trichocarpa]
          Length = 695

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/109 (58%), Positives = 76/109 (69%), Gaps = 4/109 (3%)
 Frame = -3

Query: 317 MARNTGFLVLLLSIASICEAAN----FNPISDSHRPAALELFTPTNGSLQRLEETYEALR 150
           MARN G  ++L++ A I  +A     F PISD HR AALELF P  GS   +EETYE LR
Sbjct: 1   MARNLGGFLVLIAAALIYSSALASYIFQPISDLHRSAALELFNPLGGSFPSVEETYEELR 60

Query: 149 TFEILGIDKESDIKTPTCPTVVDTLWSPSSALKDLFQALRVNGILKCEL 3
           TFE+LGIDK SDI T  C +V + L S SS LKDLF AL+VNGILKC++
Sbjct: 61  TFEVLGIDKRSDISTAACQSVSEILGSSSSTLKDLFYALKVNGILKCDI 109


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