BLASTX nr result

ID: Cephaelis21_contig00013423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013423
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein ...   178   2e-42
ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea ma...   178   2e-42
ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japonica Group] g...   177   3e-42
gb|EAY81419.1| hypothetical protein OsI_36586 [Oryza sativa Indi...   177   3e-42
gb|ACG42290.1| h/ACA ribonucleoprotein complex subunit 1-like pr...   176   6e-42

>ref|XP_004147534.1| PREDICTED: putative H/ACA ribonucleoprotein complex subunit 1-like
           protein 1-like [Cucumis sativus]
           gi|449484903|ref|XP_004157013.1| PREDICTED: putative
           H/ACA ribonucleoprotein complex subunit 1-like protein
           1-like [Cucumis sativus]
          Length = 194

 Score =  178 bits (451), Expect = 2e-42
 Identities = 85/95 (89%), Positives = 93/95 (97%)
 Frame = -1

Query: 761 AEVVEVSVFANACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESFFSIKM 582
           +EVVEVS F +ACEGDAVTKLTNEKIP+FNAPIYLQNKTQIGKVDEIFGPINES+FSIKM
Sbjct: 47  SEVVEVSTFLHACEGDAVTKLTNEKIPFFNAPIYLQNKTQIGKVDEIFGPINESYFSIKM 106

Query: 581 MEGIVASSYSAGDKFYIDPAKLLPLSRFLPQPKGQ 477
           MEGIVA+SY++GDKFYIDPAKLLPL+RFLPQPKGQ
Sbjct: 107 MEGIVATSYASGDKFYIDPAKLLPLARFLPQPKGQ 141


>ref|NP_001132376.1| uncharacterized protein LOC100193822 [Zea mays]
           gi|194694218|gb|ACF81193.1| unknown [Zea mays]
          Length = 191

 Score =  178 bits (451), Expect = 2e-42
 Identities = 83/96 (86%), Positives = 91/96 (94%)
 Frame = -1

Query: 761 AEVVEVSVFANACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESFFSIKM 582
           AEVVEVS F +ACEGDAVTKLTNEK+PYFNAPIYLQNKTQ+GKVDEIFGPINES+FS+KM
Sbjct: 46  AEVVEVSTFVHACEGDAVTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINESYFSVKM 105

Query: 581 MEGIVASSYSAGDKFYIDPAKLLPLSRFLPQPKGQA 474
           MEGI+A+SY  GDKFYIDP KLLPLSRFLPQPKGQ+
Sbjct: 106 MEGIIATSYKEGDKFYIDPMKLLPLSRFLPQPKGQS 141


>ref|NP_001068150.1| Os11g0579800 [Oryza sativa Japonica Group]
           gi|77551701|gb|ABA94498.1| H/ACA ribonucleoprotein
           complex subunit 1-like protein 1, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113645372|dbj|BAF28513.1| Os11g0579800 [Oryza sativa
           Japonica Group] gi|125577612|gb|EAZ18834.1| hypothetical
           protein OsJ_34372 [Oryza sativa Japonica Group]
           gi|215768512|dbj|BAH00741.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 196

 Score =  177 bits (450), Expect = 3e-42
 Identities = 85/96 (88%), Positives = 91/96 (94%)
 Frame = -1

Query: 761 AEVVEVSVFANACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESFFSIKM 582
           AEVVEVS F +ACEGDAVTKLTNEK+PYFNAPIYLQNKTQIGKVDEIFGPINES FSIKM
Sbjct: 51  AEVVEVSTFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINESLFSIKM 110

Query: 581 MEGIVASSYSAGDKFYIDPAKLLPLSRFLPQPKGQA 474
           +EGI+A+SYS GDKFYIDP KLLPLSRFLPQPKGQ+
Sbjct: 111 LEGIIATSYSEGDKFYIDPMKLLPLSRFLPQPKGQS 146


>gb|EAY81419.1| hypothetical protein OsI_36586 [Oryza sativa Indica Group]
          Length = 196

 Score =  177 bits (450), Expect = 3e-42
 Identities = 85/96 (88%), Positives = 91/96 (94%)
 Frame = -1

Query: 761 AEVVEVSVFANACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESFFSIKM 582
           AEVVEVS F +ACEGDAVTKLTNEK+PYFNAPIYLQNKTQIGKVDEIFGPINES FSIKM
Sbjct: 51  AEVVEVSTFMHACEGDAVTKLTNEKVPYFNAPIYLQNKTQIGKVDEIFGPINESLFSIKM 110

Query: 581 MEGIVASSYSAGDKFYIDPAKLLPLSRFLPQPKGQA 474
           +EGI+A+SYS GDKFYIDP KLLPLSRFLPQPKGQ+
Sbjct: 111 LEGIIATSYSEGDKFYIDPMKLLPLSRFLPQPKGQS 146


>gb|ACG42290.1| h/ACA ribonucleoprotein complex subunit 1-like protein 1 [Zea mays]
          Length = 191

 Score =  176 bits (447), Expect = 6e-42
 Identities = 82/96 (85%), Positives = 91/96 (94%)
 Frame = -1

Query: 761 AEVVEVSVFANACEGDAVTKLTNEKIPYFNAPIYLQNKTQIGKVDEIFGPINESFFSIKM 582
           AEVVEVS F ++CEGDAVTKLTNEK+PYFNAPIYLQNKTQ+GKVDEIFGPINES+FS+KM
Sbjct: 46  AEVVEVSTFLHSCEGDAVTKLTNEKVPYFNAPIYLQNKTQVGKVDEIFGPINESYFSVKM 105

Query: 581 MEGIVASSYSAGDKFYIDPAKLLPLSRFLPQPKGQA 474
           MEGI+A+SY  GDKFYIDP KLLPLSRFLPQPKGQ+
Sbjct: 106 MEGIIATSYKEGDKFYIDPMKLLPLSRFLPQPKGQS 141


Top