BLASTX nr result

ID: Cephaelis21_contig00013379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013379
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi...   229   6e-58
emb|CBI33393.3| unnamed protein product [Vitis vinifera]              229   6e-58
ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|2...   213   4e-53
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi...   211   2e-52
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ...   204   3e-50

>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
            [Vitis vinifera]
          Length = 788

 Score =  229 bits (585), Expect = 6e-58
 Identities = 113/191 (59%), Positives = 137/191 (71%)
 Frame = -3

Query: 975  VKLFQDMEGHAVIPDQVTFVGVLSACNHAGLTSVGLDLFDCMTRKYGIEPLAEHYACMVD 796
            +KLF  ME   V PD+VTFVG+LSAC+H GL   GL LF CM + Y IEPLAEHYACMVD
Sbjct: 540  LKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVD 599

Query: 795  LLGRAGRLEEAFELVRKMNVKKTAAIWGALSWACCLHKNLKLADFAAQKLLEIEPHKISN 616
            LLGRAGRLEEAF+LVR M +   A IWGAL  AC +H NL+LA FAA+KLLE EPHK SN
Sbjct: 600  LLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSN 659

Query: 615  LVLLLNTYAESGRWDELERVRNSLMQNGTEKEPGCSWVENQNGFLVFLSNKITCPQSADV 436
             VLL N  AE+GRWDE+ RVR  + + G EK+PG SW+E QN    FLS     P++ ++
Sbjct: 660  YVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVEL 719

Query: 435  NRVLQILSSQM 403
              +L+ L++ M
Sbjct: 720  CHILRSLTAHM 730


>emb|CBI33393.3| unnamed protein product [Vitis vinifera]
          Length = 752

 Score =  229 bits (585), Expect = 6e-58
 Identities = 113/191 (59%), Positives = 137/191 (71%)
 Frame = -3

Query: 975 VKLFQDMEGHAVIPDQVTFVGVLSACNHAGLTSVGLDLFDCMTRKYGIEPLAEHYACMVD 796
           +KLF  ME   V PD+VTFVG+LSAC+H GL   GL LF CM + Y IEPLAEHYACMVD
Sbjct: 302 LKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVD 361

Query: 795 LLGRAGRLEEAFELVRKMNVKKTAAIWGALSWACCLHKNLKLADFAAQKLLEIEPHKISN 616
           LLGRAGRLEEAF+LVR M +   A IWGAL  AC +H NL+LA FAA+KLLE EPHK SN
Sbjct: 362 LLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSN 421

Query: 615 LVLLLNTYAESGRWDELERVRNSLMQNGTEKEPGCSWVENQNGFLVFLSNKITCPQSADV 436
            VLL N  AE+GRWDE+ RVR  + + G EK+PG SW+E QN    FLS     P++ ++
Sbjct: 422 YVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVEL 481

Query: 435 NRVLQILSSQM 403
             +L+ L++ M
Sbjct: 482 CHILRSLTAHM 492


>ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|222867186|gb|EEF04317.1|
            predicted protein [Populus trichocarpa]
          Length = 702

 Score =  213 bits (543), Expect = 4e-53
 Identities = 107/191 (56%), Positives = 133/191 (69%)
 Frame = -3

Query: 975  VKLFQDMEGHAVIPDQVTFVGVLSACNHAGLTSVGLDLFDCMTRKYGIEPLAEHYACMVD 796
            +KLF++M    + PD+VTF+G+LSACNHAG+   GL LF CM++ Y IEPLAEHYACMVD
Sbjct: 502  LKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVD 561

Query: 795  LLGRAGRLEEAFELVRKMNVKKTAAIWGALSWACCLHKNLKLADFAAQKLLEIEPHKISN 616
            LLGR GRL+EAFE+VR M VK TA +WGAL  AC  H NL+L   AA KL E EPHK SN
Sbjct: 562  LLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSN 621

Query: 615  LVLLLNTYAESGRWDELERVRNSLMQNGTEKEPGCSWVENQNGFLVFLSNKITCPQSADV 436
             VLL N +AE+ RW+E++ VR  +  + T KEPGCSWVE +N    FLS+  T     D+
Sbjct: 622  YVLLSNIHAEANRWNEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDDST-RSRPDI 680

Query: 435  NRVLQILSSQM 403
               L  L+S +
Sbjct: 681  GVTLASLNSHI 691


>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Glycine max]
          Length = 748

 Score =  211 bits (538), Expect = 2e-52
 Identities = 99/192 (51%), Positives = 133/192 (69%)
 Frame = -3

Query: 972  KLFQDMEGHAVIPDQVTFVGVLSACNHAGLTSVGLDLFDCMTRKYGIEPLAEHYACMVDL 793
            K F+ M    V+PD+VTF+G+LSAC+HAGL + GLD+F CM   + IEPLAEHY+C+VDL
Sbjct: 543  KAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDL 602

Query: 792  LGRAGRLEEAFELVRKMNVKKTAAIWGALSWACCLHKNLKLADFAAQKLLEIEPHKISNL 613
            LGR GRLEEAF  VR M VK  A +WG+L  AC +HKNL+L  FAA++L E+EPH  SN 
Sbjct: 603  LGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNY 662

Query: 612  VLLLNTYAESGRWDELERVRNSLMQNGTEKEPGCSWVENQNGFLVFLSNKITCPQSADVN 433
            + L N +AE+GRW+E+ERVR  +      K+PGCSW+E QN    FLS+     +  ++ 
Sbjct: 663  ITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKLRPKNIQ 722

Query: 432  RVLQILSSQMME 397
             +L  L++ M +
Sbjct: 723  IILNTLAAHMRD 734


>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355513593|gb|AES95216.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  204 bits (519), Expect = 3e-50
 Identities = 95/190 (50%), Positives = 132/190 (69%)
 Frame = -3

Query: 966  FQDMEGHAVIPDQVTFVGVLSACNHAGLTSVGLDLFDCMTRKYGIEPLAEHYACMVDLLG 787
            F+ M     +PD+VTF+G+LSAC+HAGLT+ G+DLF CM   + IEPLAEHY+C+VDLLG
Sbjct: 545  FEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLG 604

Query: 786  RAGRLEEAFELVRKMNVKKTAAIWGALSWACCLHKNLKLADFAAQKLLEIEPHKISNLVL 607
            R GRLEEAF +VR M VK  A +WG+L  AC +HKN++L   AA +LLE+EPH  SN + 
Sbjct: 605  RMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYIT 664

Query: 606  LLNTYAESGRWDELERVRNSLMQNGTEKEPGCSWVENQNGFLVFLSNKITCPQSADVNRV 427
            L N +AE+GRW+++ER+R  + +    K PGCSW+E QN    F+S+     ++  +  +
Sbjct: 665  LSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKII 724

Query: 426  LQILSSQMME 397
            L  LS+ M +
Sbjct: 725  LNTLSAHMRD 734


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