BLASTX nr result

ID: Cephaelis21_contig00013284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013284
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45214.1| unknown [Lotus japonicus]                               46   6e-08
gb|AFK44564.1| unknown [Medicago truncatula]                           46   1e-07
ref|XP_003548086.1| PREDICTED: thylakoid membrane phosphoprotein...    46   3e-07
gb|AAM63765.1| unknown [Arabidopsis thaliana]                          43   6e-07
ref|XP_003521827.1| PREDICTED: thylakoid membrane phosphoprotein...    44   1e-06

>gb|AFK45214.1| unknown [Lotus japonicus]
          Length = 163

 Score = 45.8 bits (107), Expect(2) = 6e-08
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +2

Query: 41  LLQAIDRLPLIPGILQLVGIGYTG 112
           LL AID+LPLIPG+L+LVGIGYTG
Sbjct: 109 LLSAIDKLPLIPGVLELVGIGYTG 132



 Score = 35.8 bits (81), Expect(2) = 6e-08
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +1

Query: 232 TQWFAYKNLVFKPDRYHIYNNI 297
           T WFAYKNLVFKPDR  +   I
Sbjct: 131 TGWFAYKNLVFKPDREDLLQKI 152


>gb|AFK44564.1| unknown [Medicago truncatula]
          Length = 170

 Score = 45.8 bits (107), Expect(2) = 1e-07
 Identities = 19/24 (79%), Positives = 23/24 (95%)
 Frame = +2

Query: 41  LLQAIDRLPLIPGILQLVGIGYTG 112
           L+ AIDRLPLIPG+L+L+GIGYTG
Sbjct: 116 LISAIDRLPLIPGVLELIGIGYTG 139



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +1

Query: 232 TQWFAYKNLVFKPDRYHIYNNILFSLAT*IG 324
           T WFAYKN+VFKP+R  +   +  ++   IG
Sbjct: 138 TGWFAYKNVVFKPEREELIQKVKETITAIIG 168


>ref|XP_003548086.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
           chloroplastic-like [Glycine max]
          Length = 168

 Score = 45.8 bits (107), Expect(2) = 3e-07
 Identities = 20/24 (83%), Positives = 23/24 (95%)
 Frame = +2

Query: 41  LLQAIDRLPLIPGILQLVGIGYTG 112
           L+ AIDRLPLIPGIL++VGIGYTG
Sbjct: 114 LISAIDRLPLIPGILEIVGIGYTG 137



 Score = 33.5 bits (75), Expect(2) = 3e-07
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 7/32 (21%)
 Frame = +1

Query: 232 TQWFAYKNLVFKPDRYHI-------YNNILFS 306
           T WF YKN+VFKPDR  +       YN IL S
Sbjct: 136 TGWFVYKNIVFKPDREALVRKVKETYNEILGS 167


>gb|AAM63765.1| unknown [Arabidopsis thaliana]
          Length = 174

 Score = 43.1 bits (100), Expect(2) = 6e-07
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = +2

Query: 41  LLQAIDRLPLIPGILQLVGIGYTG 112
           ++  IDRLPL+PG+L+LVGIGYTG
Sbjct: 120 MISPIDRLPLVPGVLELVGIGYTG 143



 Score = 35.0 bits (79), Expect(2) = 6e-07
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 232 TQWFAYKNLVFKPDRYHIYNNI 297
           T WF YKNLVFKPDR  ++  +
Sbjct: 142 TGWFTYKNLVFKPDREALFEKV 163


>ref|XP_003521827.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
           chloroplastic-like isoform 1 [Glycine max]
          Length = 171

 Score = 43.9 bits (102), Expect(2) = 1e-06
 Identities = 18/24 (75%), Positives = 23/24 (95%)
 Frame = +2

Query: 41  LLQAIDRLPLIPGILQLVGIGYTG 112
           ++ AIDRLPLIPG+L++VGIGYTG
Sbjct: 117 MISAIDRLPLIPGLLEVVGIGYTG 140



 Score = 33.5 bits (75), Expect(2) = 1e-06
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +1

Query: 232 TQWFAYKNLVFKPDR 276
           T WFAYKN VFKPDR
Sbjct: 139 TGWFAYKNFVFKPDR 153


Top