BLASTX nr result

ID: Cephaelis21_contig00013136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013136
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, ...   316   7e-84
ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloro...   313   5e-83
ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycin...   293   6e-77
gb|AFK44729.1| unknown [Lotus japonicus]                              288   1e-75
ref|XP_002519977.1| ribosomal protein L17, putative [Ricinus com...   288   2e-75

>sp|O80363.1|RK17_TOBAC RecName: Full=50S ribosomal protein L17, chloroplastic; AltName:
           Full=CL17; Flags: Precursor gi|189096138|pdb|3BBO|P
           Chain P, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|3298443|dbj|BAA31512.1| chloroplast
           ribosomal protein L17 [Nicotiana tabacum]
          Length = 205

 Score =  316 bits (809), Expect = 7e-84
 Identities = 166/210 (79%), Positives = 182/210 (86%), Gaps = 1/210 (0%)
 Frame = +2

Query: 140 ATACATWSMSSLKAALPSV-PIQTPPSSLHFSIGKGSPSQSCIKVSTFTKPSPMPLQSFV 316
           A+A  TWSMS LK+ALPS+ PI +  SSL FS G   PS S +++    K S   L SFV
Sbjct: 2   ASASTTWSMSCLKSALPSIQPISS--SSLRFSCG---PSPSRLRICK-PKSSSRLLHSFV 55

Query: 317 GLVPFNPLLSLFSQDSATFEHSFTIIDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTT 496
           GL P +PLLSL SQDS +FEHSFT+IDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTT
Sbjct: 56  GLAPLHPLLSLSSQDSTSFEHSFTVIDNGGRVFAMRHGRKVPKLNRPPDQRRALLRGLTT 115

Query: 497 QLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVPER 676
           QLLKHGRIKTT+ARA A+RKYVDKMIT+AKDGSLHKRRQALGFIYEKQIVHALFAEVP+R
Sbjct: 116 QLLKHGRIKTTKARARAVRKYVDKMITMAKDGSLHKRRQALGFIYEKQIVHALFAEVPDR 175

Query: 677 YGDRNGGYTRILRTLPRRGDNAPMAYIELV 766
           YG+RNGGYTRI+RTLPRRGDNAPMAYIELV
Sbjct: 176 YGERNGGYTRIIRTLPRRGDNAPMAYIELV 205


>ref|XP_002275983.1| PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Vitis
           vinifera]
          Length = 198

 Score =  313 bits (802), Expect = 5e-83
 Identities = 162/216 (75%), Positives = 181/216 (83%), Gaps = 2/216 (0%)
 Frame = +2

Query: 125 MACGSATACATWSMSSLKAALPSVP-IQTPPSSLHFSIGKGSPSQSCIKVSTFTKPSPMP 301
           MACGS+ +C TWSM++L++ALPS+P +   PS +                 T T+P PMP
Sbjct: 1   MACGSSASC-TWSMATLRSALPSLPSLLCAPSRI-----------------TLTRPKPMP 42

Query: 302 -LQSFVGLVPFNPLLSLFSQDSATFEHSFTIIDNGGRVFAMRHGRKVPKLNRPPDQRRAL 478
            L SF GL P +PLLSL S +S +FEH+FTIIDNGGR+ AMRHGR+VPKLNRPPDQRRAL
Sbjct: 43  ILPSFTGLAPLSPLLSLSSPESTSFEHNFTIIDNGGRISAMRHGRRVPKLNRPPDQRRAL 102

Query: 479 LRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALF 658
           LRGLTTQLLK+GRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALF
Sbjct: 103 LRGLTTQLLKYGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALF 162

Query: 659 AEVPERYGDRNGGYTRILRTLPRRGDNAPMAYIELV 766
           AEVP+RYGDRNGGYTRI+RTLPRRGDNAPMAYIELV
Sbjct: 163 AEVPDRYGDRNGGYTRIIRTLPRRGDNAPMAYIELV 198


>ref|NP_001236786.1| uncharacterized protein LOC100500099 [Glycine max]
           gi|255629133|gb|ACU14911.1| unknown [Glycine max]
          Length = 217

 Score =  293 bits (749), Expect = 6e-77
 Identities = 158/218 (72%), Positives = 180/218 (82%), Gaps = 4/218 (1%)
 Frame = +2

Query: 125 MACGSATACATWSMSSLKAALPSVPIQTPP--SSLHFSIGKGSPSQSCIKVS-TFTKPSP 295
           +A  + ++ + WSM+SL++ALPS    +PP  SSL F +   SPS S  K+  + TKP  
Sbjct: 4   VAVMATSSDSRWSMASLRSALPS---HSPPVSSSLRFPVLPSSPSSSSTKLRISRTKPKS 60

Query: 296 MPLQSFVGLVPFNPL-LSLFSQDSATFEHSFTIIDNGGRVFAMRHGRKVPKLNRPPDQRR 472
           + L SF GL P NP+ LS  S +    +HSFTIIDNGGRV AMRHGR+VPKLNRPPDQRR
Sbjct: 61  L-LTSFTGLAPLNPIFLSAPSSEYTGCDHSFTIIDNGGRVTAMRHGRRVPKLNRPPDQRR 119

Query: 473 ALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA 652
           AL+RGLTTQLLK+GRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA
Sbjct: 120 ALIRGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA 179

Query: 653 LFAEVPERYGDRNGGYTRILRTLPRRGDNAPMAYIELV 766
           LFAEVPERYG+RNGGYTRI+RTLPRRGDNAPMAYIELV
Sbjct: 180 LFAEVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217


>gb|AFK44729.1| unknown [Lotus japonicus]
          Length = 216

 Score =  288 bits (738), Expect = 1e-75
 Identities = 156/215 (72%), Positives = 174/215 (80%), Gaps = 1/215 (0%)
 Frame = +2

Query: 125 MACGSATACATWSMSSLKAALPSVPIQTPPSSLHFSIGKGSPSQSCIKVSTFTKPSPMPL 304
           MA GS T    WSMSSL++ALPS       SSL F   +   S   +++S  +KP  + L
Sbjct: 7   MATGSETR---WSMSSLRSALPSPSPSPSSSSLRFPQFRRPSSPPSLRISK-SKPQAL-L 61

Query: 305 QSFVGLVPFNPL-LSLFSQDSATFEHSFTIIDNGGRVFAMRHGRKVPKLNRPPDQRRALL 481
            SF GL P + L LS  S +  +F H FTIIDNGGRV+AMRHGR+VPKLNRPPDQRRAL+
Sbjct: 62  PSFTGLAPLHHLSLSSSSSEFNSFSHCFTIIDNGGRVYAMRHGRRVPKLNRPPDQRRALI 121

Query: 482 RGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFA 661
           RGLTTQLLK+GRIKTTRARASA+RKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFA
Sbjct: 122 RGLTTQLLKYGRIKTTRARASAIRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFA 181

Query: 662 EVPERYGDRNGGYTRILRTLPRRGDNAPMAYIELV 766
           EVPERYG+RNGGYTRI+RTLPRRGDNAPMAYIELV
Sbjct: 182 EVPERYGERNGGYTRIIRTLPRRGDNAPMAYIELV 216


>ref|XP_002519977.1| ribosomal protein L17, putative [Ricinus communis]
           gi|223540741|gb|EEF42301.1| ribosomal protein L17,
           putative [Ricinus communis]
          Length = 217

 Score =  288 bits (736), Expect = 2e-75
 Identities = 151/218 (69%), Positives = 172/218 (78%), Gaps = 4/218 (1%)
 Frame = +2

Query: 125 MACGSATACAT----WSMSSLKAALPSVPIQTPPSSLHFSIGKGSPSQSCIKVSTFTKPS 292
           MA     AC+T    W+MSSL ++LPS    +  SSL  ++   SP    + +S   +  
Sbjct: 1   MAMAMPVACSTNNNTWNMSSLISSLPS-SASSSSSSLTAALRLQSPHPRALTLSRRHQQQ 59

Query: 293 PMPLQSFVGLVPFNPLLSLFSQDSATFEHSFTIIDNGGRVFAMRHGRKVPKLNRPPDQRR 472
           P+ L+SF GL P N LLS+   +  +FE+ F  IDNG RVF MRHGR+VPKLNRPPDQR+
Sbjct: 60  PLLLRSFTGLSPLNSLLSIGFSEYTSFENGFPSIDNGSRVFGMRHGRRVPKLNRPPDQRK 119

Query: 473 ALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA 652
           ALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA
Sbjct: 120 ALLRGLTTQLLKHGRIKTTRARASAMRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHA 179

Query: 653 LFAEVPERYGDRNGGYTRILRTLPRRGDNAPMAYIELV 766
           LFAEVP+RYG+RNGGYTRI+RTLPRRGDNAPMAYIELV
Sbjct: 180 LFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 217


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