BLASTX nr result

ID: Cephaelis21_contig00013132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013132
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24890.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003563009.1| PREDICTED: 60S ribosomal protein L36a-like i...    57   2e-06
emb|CBI27147.3| unnamed protein product [Vitis vinifera]               57   2e-06
gb|EKV05032.1| hypothetical protein PDIP_85240 [Penicillium digi...    56   3e-06
gb|AAK94425.1|AF398144_1 60S ribosomal protein L144 [Brassica ra...    56   3e-06

>emb|CBI24890.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/38 (73%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
 Frame = +1

Query: 115 VDLSLDSFPPSA-KMVNVPKTKKTYCKSKDCRKHTLHK 225
           + LS    PP   KMVNVPKTKKTYCKSK+CRKHTLHK
Sbjct: 22  LQLSFSLHPPKPPKMVNVPKTKKTYCKSKECRKHTLHK 59


>ref|XP_003563009.1| PREDICTED: 60S ribosomal protein L36a-like isoform 2 [Brachypodium
           distachyon]
          Length = 133

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/44 (56%), Positives = 32/44 (72%)
 Frame = +1

Query: 94  SILQKFSVDLSLDSFPPSAKMVNVPKTKKTYCKSKDCRKHTLHK 225
           S+   +S D ++  FP     VNVPKTKKTYCK+K+C+KHTLHK
Sbjct: 9   SLRPDYSNDATISIFPEVPIGVNVPKTKKTYCKNKECKKHTLHK 52


>emb|CBI27147.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +1

Query: 145 SAKMVNVPKTKKTYCKSKDCRKHTLHK 225
           S  MVNVPKTKKTYCKSK+CRKHTLHK
Sbjct: 207 SVTMVNVPKTKKTYCKSKECRKHTLHK 233


>gb|EKV05032.1| hypothetical protein PDIP_85240 [Penicillium digitatum Pd1]
           gi|425775196|gb|EKV13478.1| hypothetical protein
           PDIG_38600 [Penicillium digitatum PHI26]
          Length = 455

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
 Frame = +1

Query: 40  ISNFPICVARFSSVG--VIYSILQKFSVDLSLDSFPP-SAKMVNVPKTKKTYCKSKDCRK 210
           +S +PI   R  S    +  ++L++ ++     S+P  S KMVN+PKT++TYCKSK+C K
Sbjct: 309 VSAYPIGPKRVKSHNPTIALALLRQATIQRPPPSYPAKSVKMVNIPKTRRTYCKSKECHK 368

Query: 211 HTLHK 225
           HT HK
Sbjct: 369 HTQHK 373


>gb|AAK94425.1|AF398144_1 60S ribosomal protein L144 [Brassica rapa subsp. pekinensis]
          Length = 119

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/26 (84%), Positives = 26/26 (100%)
 Frame = +1

Query: 148 AKMVNVPKTKKTYCKSKDCRKHTLHK 225
           AKMVN+PKTKKTYCK+K+C+KHTLHK
Sbjct: 13  AKMVNIPKTKKTYCKNKECKKHTLHK 38


Top