BLASTX nr result
ID: Cephaelis21_contig00013073
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00013073
(774 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|2... 84 6e-24
ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like... 81 1e-23
ref|XP_003602225.1| Splicing factor 3a [Medicago truncatula] gi|... 80 1e-23
gb|AFK47792.1| unknown [Medicago truncatula] 80 1e-23
gb|ACJ85552.1| unknown [Medicago truncatula] 80 1e-23
>ref|XP_002317774.1| predicted protein [Populus trichocarpa] gi|222858447|gb|EEE95994.1|
predicted protein [Populus trichocarpa]
Length = 509
Score = 83.6 bits (205), Expect(2) = 6e-24
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = +1
Query: 238 MSSILLEVTRASHXXXXXXXXXXXKDLQSEPPTARERLYQRHRVRHMIDQITETTNKLTE 417
MSS LLEVTRASH KDLQ+EP ++RL+Q HRVR+MID I TT KL E
Sbjct: 1 MSSNLLEVTRASHEEVERLERLIVKDLQNEPANNKDRLFQSHRVRNMIDNIITTTEKLVE 60
Query: 418 IYEDKDNARK 447
+YEDKDNAR+
Sbjct: 61 VYEDKDNARR 70
Score = 53.5 bits (127), Expect(2) = 6e-24
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +2
Query: 461 HRRHPAACVVDVNDEYEQLLKEEPQIEFSGEAIQG 565
HRRHPAA VVD N++YE +LKEEP IEF+GE G
Sbjct: 101 HRRHPAARVVDANEDYEAMLKEEPVIEFTGEEAFG 135
Score = 76.3 bits (186), Expect = 7e-12
Identities = 35/60 (58%), Positives = 41/60 (68%)
Frame = +3
Query: 594 VYFIERTEPLQDIDRMFSKVTTEFEEQWTSXXXXXXXXXXXXXXHAPVEHTVIDLDYYST 773
VYF +RTEPLQD+DR+FSKVTTEFEEQW + H +HTVIDLD+YST
Sbjct: 193 VYFFQRTEPLQDLDRIFSKVTTEFEEQWENDAVQGWEKTSQENGHLSADHTVIDLDFYST 252
>ref|XP_003526707.1| PREDICTED: splicing factor 3A subunit 3-like [Glycine max]
Length = 509
Score = 80.9 bits (198), Expect(2) = 1e-23
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +1
Query: 238 MSSILLEVTRASHXXXXXXXXXXXKDLQSEPPTARERLYQRHRVRHMIDQITETTNKLTE 417
MSS +LEVTRA+H K+LQ++P + +ERLYQ HRVR+MID IT TT KL
Sbjct: 1 MSSTVLEVTRAAHEEVERLERLIVKELQNDPASNKERLYQSHRVRNMIDTITSTTEKLIG 60
Query: 418 IYEDKDNARK 447
+YED DNARK
Sbjct: 61 VYEDNDNARK 70
Score = 55.1 bits (131), Expect(2) = 1e-23
Identities = 25/35 (71%), Positives = 27/35 (77%)
Frame = +2
Query: 461 HRRHPAACVVDVNDEYEQLLKEEPQIEFSGEAIQG 565
HR+HP A VVD ND+YE LL EEPQIEFSGE G
Sbjct: 101 HRKHPVARVVDANDDYETLLNEEPQIEFSGEESLG 135
Score = 68.2 bits (165), Expect = 2e-09
Identities = 32/60 (53%), Positives = 36/60 (60%)
Frame = +3
Query: 594 VYFIERTEPLQDIDRMFSKVTTEFEEQWTSXXXXXXXXXXXXXXHAPVEHTVIDLDYYST 773
+YF +RTEPLQD+DR+ SKVTTEFEE W H EH IDLDYYST
Sbjct: 193 LYFFQRTEPLQDLDRILSKVTTEFEESWVVGKVQRWENDNQENGHVLAEHAPIDLDYYST 252
>ref|XP_003602225.1| Splicing factor 3a [Medicago truncatula]
gi|355491273|gb|AES72476.1| Splicing factor 3a [Medicago
truncatula]
Length = 508
Score = 80.1 bits (196), Expect(2) = 1e-23
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +1
Query: 238 MSSILLEVTRASHXXXXXXXXXXXKDLQSEPPTARERLYQRHRVRHMIDQITETTNKLTE 417
MSS LLE TRA+H KDLQ+EP + ++RLYQ HRVR+MI IT TT +L +
Sbjct: 1 MSSTLLEATRAAHEEVERLERVIVKDLQNEPTSNKDRLYQSHRVRNMIVTITSTTERLID 60
Query: 418 IYEDKDNARK 447
IY+DKDNARK
Sbjct: 61 IYDDKDNARK 70
Score = 55.8 bits (133), Expect(2) = 1e-23
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2
Query: 461 HRRHPAACVVDVNDEYEQLLKEEPQIEFSGEAIQG 565
HR+HPAA VVD ND++E LLKEEP+IEFSGE G
Sbjct: 101 HRKHPAARVVDANDDFEDLLKEEPKIEFSGEEAFG 135
Score = 71.2 bits (173), Expect = 2e-10
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = +3
Query: 600 FIERTEPLQDIDRMFSKVTTEFEEQWTSXXXXXXXXXXXXXXHAPVEHTVIDLDYYST 773
F RTEPLQD+DR+FSKVTTEF E W + H P +HT IDLDYYST
Sbjct: 195 FFHRTEPLQDLDRIFSKVTTEFNENWATGRVLGWENVNQENGHVPAQHTAIDLDYYST 252
>gb|AFK47792.1| unknown [Medicago truncatula]
Length = 429
Score = 80.1 bits (196), Expect(2) = 1e-23
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +1
Query: 238 MSSILLEVTRASHXXXXXXXXXXXKDLQSEPPTARERLYQRHRVRHMIDQITETTNKLTE 417
MSS LLE TRA+H KDLQ+EP + ++RLYQ HRVR+MI IT TT +L +
Sbjct: 1 MSSTLLEATRAAHEEVERLERVIVKDLQNEPTSNKDRLYQSHRVRNMIVTITSTTERLID 60
Query: 418 IYEDKDNARK 447
IY+DKDNARK
Sbjct: 61 IYDDKDNARK 70
Score = 55.8 bits (133), Expect(2) = 1e-23
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2
Query: 461 HRRHPAACVVDVNDEYEQLLKEEPQIEFSGEAIQG 565
HR+HPAA VVD ND++E LLKEEP+IEFSGE G
Sbjct: 101 HRKHPAARVVDANDDFEDLLKEEPKIEFSGEEAFG 135
Score = 71.2 bits (173), Expect = 2e-10
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = +3
Query: 600 FIERTEPLQDIDRMFSKVTTEFEEQWTSXXXXXXXXXXXXXXHAPVEHTVIDLDYYST 773
F RTEPLQD+DR+FSKVTTEF E W + H P +HT IDLDYYST
Sbjct: 195 FFHRTEPLQDLDRIFSKVTTEFNENWATGRVLGWENVNQENGHVPAQHTAIDLDYYST 252
>gb|ACJ85552.1| unknown [Medicago truncatula]
Length = 241
Score = 80.1 bits (196), Expect(2) = 1e-23
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +1
Query: 238 MSSILLEVTRASHXXXXXXXXXXXKDLQSEPPTARERLYQRHRVRHMIDQITETTNKLTE 417
MSS LLE TRA+H KDLQ+EP + ++RLYQ HRVR+MI IT TT +L +
Sbjct: 1 MSSTLLEATRAAHEEVERLERVIVKDLQNEPTSNKDRLYQSHRVRNMIVTITSTTERLID 60
Query: 418 IYEDKDNARK 447
IY+DKDNARK
Sbjct: 61 IYDDKDNARK 70
Score = 55.8 bits (133), Expect(2) = 1e-23
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2
Query: 461 HRRHPAACVVDVNDEYEQLLKEEPQIEFSGEAIQG 565
HR+HPAA VVD ND++E LLKEEP+IEFSGE G
Sbjct: 101 HRKHPAARVVDANDDFEDLLKEEPKIEFSGEEAFG 135