BLASTX nr result

ID: Cephaelis21_contig00013039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013039
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplasti...   259   7e-72
gb|ABK95780.1| unknown [Populus trichocarpa]                          256   4e-70
ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ri...   255   6e-70
ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplasti...   261   8e-70
ref|XP_003594957.1| NifU-like protein [Medicago truncatula] gi|3...   258   2e-66

>ref|XP_002268218.1| PREDICTED: nifU-like protein 3, chloroplastic [Vitis vinifera]
           gi|297735420|emb|CBI17860.3| unnamed protein product
           [Vitis vinifera]
          Length = 237

 Score =  259 bits (662), Expect(2) = 7e-72
 Identities = 135/163 (82%), Positives = 143/163 (87%)
 Frame = +1

Query: 487 GSVVLPSCVLPLTQENVEKVLDEVRPALMADGGNVALHEIDGLVVVLKLQGACGSCPSST 666
           G +VLPSCVLPLT+ENVEKVLDEVRP LMADGGNVALHEIDGLVVVLKLQGACGSCPSST
Sbjct: 74  GILVLPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSST 133

Query: 667 MTLKMGIETRLRDKIPEILDVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGELGLV 846
           MTLKMGIETRLRDKIPEI  VEQILDTETG              IRPYLAGTGGG L LV
Sbjct: 134 MTLKMGIETRLRDKIPEIEAVEQILDTETGLELNEENVEKVLAEIRPYLAGTGGGVLELV 193

Query: 847 EINDYVVRVQLSGPAAGVMTVRVALTQKLREKIPAIAAVQLME 975
           +INDYV++V+LSGPAAGVMTVRVALTQKLREKIPAIAAVQL++
Sbjct: 194 QINDYVIKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLID 236



 Score = 39.3 bits (90), Expect(2) = 7e-72
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +2

Query: 317 KNPSWDSCSFASKQASFLRGQFKTGHFLGFYSTRRRNKHAG 439
           K P  D  +F+S+  SF+RGQF++ H LG  S R +++ AG
Sbjct: 34  KKPISDCSAFSSRDNSFMRGQFQSRHLLGCCSRRVQSRRAG 74


>gb|ABK95780.1| unknown [Populus trichocarpa]
          Length = 224

 Score =  256 bits (653), Expect(2) = 4e-70
 Identities = 132/163 (80%), Positives = 142/163 (87%)
 Frame = +1

Query: 487 GSVVLPSCVLPLTQENVEKVLDEVRPALMADGGNVALHEIDGLVVVLKLQGACGSCPSST 666
           G VV PSCVLPLT+ENVEKVLDEVRP LM DGGNVALHEIDGLVVVLKLQGACGSCPSS+
Sbjct: 62  GVVVSPSCVLPLTEENVEKVLDEVRPGLMRDGGNVALHEIDGLVVVLKLQGACGSCPSSS 121

Query: 667 MTLKMGIETRLRDKIPEILDVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGELGLV 846
           MTLKMGIET+LRDKIPEI+DVEQI+DTETG              IRPYLAGTGGG L LV
Sbjct: 122 MTLKMGIETKLRDKIPEIMDVEQIMDTETGLELNEENVEKALAEIRPYLAGTGGGVLELV 181

Query: 847 EINDYVVRVQLSGPAAGVMTVRVALTQKLREKIPAIAAVQLME 975
           +INDYVV+V+LSGPAAGVMTVRVALTQKLRE IPAIAAVQL++
Sbjct: 182 QINDYVVKVRLSGPAAGVMTVRVALTQKLRETIPAIAAVQLID 224



 Score = 37.0 bits (84), Expect(2) = 4e-70
 Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
 Frame = +2

Query: 332 DSCSFASKQASFLRGQFK--TGHFLGFYSTRRRNKHAG 439
           DSC  +SKQ +FLRGQF+  + HFL F   R R K  G
Sbjct: 25  DSCGLSSKQNAFLRGQFQFHSRHFLHFKLNRGRMKCTG 62


>ref|XP_002532084.1| Nitrogen fixation protein nifU, putative [Ricinus communis]
           gi|223528244|gb|EEF30298.1| Nitrogen fixation protein
           nifU, putative [Ricinus communis]
          Length = 220

 Score =  255 bits (652), Expect(2) = 6e-70
 Identities = 132/163 (80%), Positives = 142/163 (87%)
 Frame = +1

Query: 487 GSVVLPSCVLPLTQENVEKVLDEVRPALMADGGNVALHEIDGLVVVLKLQGACGSCPSST 666
           G VV PSCVLPLT+ENVEKVLDEVRP LMADGGNV LHEIDGLVVVLKLQGACGSCPSST
Sbjct: 58  GLVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVVLHEIDGLVVVLKLQGACGSCPSST 117

Query: 667 MTLKMGIETRLRDKIPEILDVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGELGLV 846
           MTLKMGIETRLRDKIPEI+ VEQILDTETG              IRPYLAGTGGG L LV
Sbjct: 118 MTLKMGIETRLRDKIPEIMAVEQILDTETGLELNDENVEKVLAEIRPYLAGTGGGVLELV 177

Query: 847 EINDYVVRVQLSGPAAGVMTVRVALTQKLREKIPAIAAVQLME 975
           +I+DY+V+V+LSGPAAGVMTVRVALTQKLR+KIPAIAAVQL++
Sbjct: 178 QIDDYIVKVRLSGPAAGVMTVRVALTQKLRDKIPAIAAVQLID 220



 Score = 36.6 bits (83), Expect(2) = 6e-70
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +2

Query: 317 KNPSWDSCSFASKQASFLRGQFKTGHFLGFYSTRRRNKHAG 439
           K P  D C F+S++ +FLRGQF   HF      R   K AG
Sbjct: 18  KKPVSDFCIFSSRKNAFLRGQFHIRHFSSIKLNRAPRKFAG 58


>ref|XP_004148324.1| PREDICTED: nifU-like protein 3, chloroplastic-like [Cucumis
           sativus] gi|449510563|ref|XP_004163700.1| PREDICTED:
           nifU-like protein 3, chloroplastic-like [Cucumis
           sativus]
          Length = 227

 Score =  261 bits (666), Expect(2) = 8e-70
 Identities = 134/163 (82%), Positives = 144/163 (88%)
 Frame = +1

Query: 487 GSVVLPSCVLPLTQENVEKVLDEVRPALMADGGNVALHEIDGLVVVLKLQGACGSCPSST 666
           G+VV PSCVLPLT+ENVEKVLDEVRP LMADGGNVALHEIDGLVV+LKLQGACGSCPSST
Sbjct: 65  GNVVSPSCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSST 124

Query: 667 MTLKMGIETRLRDKIPEILDVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGELGLV 846
           MTLKMGIETRLRDKIPEIL+VEQI+DTETG              IRPYLAGTGGG L ++
Sbjct: 125 MTLKMGIETRLRDKIPEILEVEQIMDTETGLELNEENVEKVLSEIRPYLAGTGGGILEVI 184

Query: 847 EINDYVVRVQLSGPAAGVMTVRVALTQKLREKIPAIAAVQLME 975
           EI DYVV+V+LSGPAAGVMTVRVALTQKLREKIPAIAAVQL+E
Sbjct: 185 EIKDYVVKVRLSGPAAGVMTVRVALTQKLREKIPAIAAVQLIE 227



 Score = 30.8 bits (68), Expect(2) = 8e-70
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 356 QASFLRGQFKTGHFLGFYSTRRRNKHAG 439
           ++SF RGQF + HFL F S+  R +H G
Sbjct: 38  KSSFFRGQFCSRHFLRFNSSCTRIRHLG 65


>ref|XP_003594957.1| NifU-like protein [Medicago truncatula] gi|355484005|gb|AES65208.1|
           NifU-like protein [Medicago truncatula]
          Length = 242

 Score =  258 bits (660), Expect = 2e-66
 Identities = 133/163 (81%), Positives = 142/163 (87%)
 Frame = +1

Query: 487 GSVVLPSCVLPLTQENVEKVLDEVRPALMADGGNVALHEIDGLVVVLKLQGACGSCPSST 666
           G VV P CVLPLT+ENVEKVLDEVRP LMADGGNVALHEIDGLVV+LKLQGACGSCPSST
Sbjct: 80  GFVVSPRCVLPLTEENVEKVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSST 139

Query: 667 MTLKMGIETRLRDKIPEILDVEQILDTETGXXXXXXXXXXXXXXIRPYLAGTGGGELGLV 846
           MTLKMGIETRLRDKIPEIL+VEQILDTETG              IRPYL GTGGG L LV
Sbjct: 140 MTLKMGIETRLRDKIPEILEVEQILDTETGLELTEDNVESVLSEIRPYLIGTGGGTLELV 199

Query: 847 EINDYVVRVQLSGPAAGVMTVRVALTQKLREKIPAIAAVQLME 975
           EINDY+V+V+LSGPAAGVMTVRVALTQKLR+KIP+IAAVQL+E
Sbjct: 200 EINDYIVKVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLIE 242


Top