BLASTX nr result

ID: Cephaelis21_contig00013026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00013026
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002520493.1| Transcription elongation factor B polypeptid...   159   7e-37
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...   157   3e-36
ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycin...   155   2e-35
ref|XP_004145280.1| PREDICTED: transcription elongation factor B...   154   2e-35

>ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|222850557|gb|EEE88104.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  164 bits (416), Expect = 2e-38
 Identities = 88/127 (69%), Positives = 93/127 (73%)
 Frame = +2

Query: 143 LKKEDMVKLISAEGFEFVVHKKAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 322
           ++KED VKLISAEGFEFV+HK+AAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIHKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 60

Query: 323 ICQYFYWSLQYASGKETEFHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLELMM 502
           ICQYFYWSLQYA+GKETEF I                                LTLELMM
Sbjct: 61  ICQYFYWSLQYANGKETEFPI-----------------------------EPELTLELMM 91

Query: 503 AANYLHT 523
           AANYLHT
Sbjct: 92  AANYLHT 98


>ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus
           communis] gi|223540335|gb|EEF41906.1| Transcription
           elongation factor B polypeptide, putative [Ricinus
           communis]
          Length = 98

 Score =  159 bits (403), Expect = 7e-37
 Identities = 86/127 (67%), Positives = 91/127 (71%)
 Frame = +2

Query: 143 LKKEDMVKLISAEGFEFVVHKKAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 322
           ++KED VKLISAEGFEFV+ K+AAMVSQTIRNMLTSPGSFAET+HGEVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTTILEK 60

Query: 323 ICQYFYWSLQYASGKETEFHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLELMM 502
           ICQYFYWSLQYA GKETEF I                                LTLELMM
Sbjct: 61  ICQYFYWSLQYAKGKETEFPI-----------------------------EPELTLELMM 91

Query: 503 AANYLHT 523
           AANYLHT
Sbjct: 92  AANYLHT 98


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score =  157 bits (398), Expect = 3e-36
 Identities = 85/127 (66%), Positives = 91/127 (71%)
 Frame = +2

Query: 143 LKKEDMVKLISAEGFEFVVHKKAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 322
           ++KED VKLISAEGFEFV+ K+AAMVSQTIRNMLTSPGSFAE EHGEVTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEK 60

Query: 323 ICQYFYWSLQYASGKETEFHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLELMM 502
           ICQYFYWSLQ+ASGK+TEF I                                LTLELMM
Sbjct: 61  ICQYFYWSLQFASGKDTEFPI-----------------------------EPELTLELMM 91

Query: 503 AANYLHT 523
           AANYLHT
Sbjct: 92  AANYLHT 98


>ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycine max]
           gi|255626357|gb|ACU13523.1| unknown [Glycine max]
          Length = 98

 Score =  155 bits (391), Expect = 2e-35
 Identities = 85/127 (66%), Positives = 89/127 (70%)
 Frame = +2

Query: 143 LKKEDMVKLISAEGFEFVVHKKAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 322
           +KKED VKLISAEGFEFVV K+AAMVSQTI NMLTSPGSFAE +HGEVTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60

Query: 323 ICQYFYWSLQYASGKETEFHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLELMM 502
           ICQYFYW LQ+ASGKETEF I                                LTLELMM
Sbjct: 61  ICQYFYWHLQFASGKETEFPI-----------------------------EPELTLELMM 91

Query: 503 AANYLHT 523
           AANYLHT
Sbjct: 92  AANYLHT 98


>ref|XP_004145280.1| PREDICTED: transcription elongation factor B polypeptide 1-like
           [Cucumis sativus] gi|449474021|ref|XP_004154051.1|
           PREDICTED: transcription elongation factor B polypeptide
           1-like [Cucumis sativus]
           gi|449508510|ref|XP_004163332.1| PREDICTED:
           transcription elongation factor B polypeptide 1-like
           [Cucumis sativus]
          Length = 98

 Score =  154 bits (390), Expect = 2e-35
 Identities = 83/127 (65%), Positives = 91/127 (71%)
 Frame = +2

Query: 143 LKKEDMVKLISAEGFEFVVHKKAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 322
           +KKED VKLISAEGFEFV+HK AAMVSQTIRNMLTSPG+FAE++H EVTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVIHKDAAMVSQTIRNMLTSPGNFAESQHREVTFPEISTTILEK 60

Query: 323 ICQYFYWSLQYASGKETEFHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLELMM 502
           ICQYF+W+LQ+ASGKETEF I                                LTLELMM
Sbjct: 61  ICQYFHWNLQFASGKETEFPI-----------------------------EPELTLELMM 91

Query: 503 AANYLHT 523
           AANYLHT
Sbjct: 92  AANYLHT 98


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