BLASTX nr result

ID: Cephaelis21_contig00012982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012982
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...   156   8e-36
ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...   145   2e-32
ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...   137   4e-30
ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vit...   136   8e-30
ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumi...   135   1e-29

>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score =  156 bits (395), Expect = 8e-36
 Identities = 92/180 (51%), Positives = 115/180 (63%), Gaps = 7/180 (3%)
 Frame = +1

Query: 256 GGNEGFGMGLVRSSSFGRKRVALTSNAIMEIDCLD-----KTPIKRQCSSEASVFTLDKS 420
           G  EG G   VRS SFGRKR+  T N +   D L+     K+P+KR CS E      +KS
Sbjct: 23  GEEEGLGFKFVRSYSFGRKRILSTKNNVNSEDLLNLDSTFKSPLKRLCSLEP-----EKS 77

Query: 421 RLEELPQDVLIKIVCGVDHDDLKMLFFVSKSIREATLIAKHSHFVYKTPRKTIGFPNAID 600
            LE LPQD+LI+++C VDHDDLK LF VSK IREATLIAK SHF Y TPRK+ GF +  D
Sbjct: 78  NLESLPQDILIRVLCRVDHDDLKQLFHVSKVIREATLIAKESHFAYSTPRKSQGFRSPFD 137

Query: 601 SDDSIEFIEVE--RAPKHVRIHKSKLNSKKLSDISVALFTPDGEEKWPRRELFMGMETEL 774
            ++  E  E+E   APK  R +KS+LN K ++D+SVALF        P++ LF  METE+
Sbjct: 138 LENPGELDEIEAPNAPKQRRSYKSRLNRKSIADVSVALFAS------PKKGLF--METEM 189


>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  145 bits (366), Expect = 2e-32
 Identities = 85/176 (48%), Positives = 107/176 (60%), Gaps = 2/176 (1%)
 Frame = +1

Query: 253 QGGNEGFGMGLVRSSSFGRKRVALTSNAIMEIDCLDKTPIKRQCSSEASVFTLDKSRLEE 432
           +G  EG G+  VRS SFGRKRV  ++N + + D L+                 +KS LE 
Sbjct: 22  RGEEEGLGLKFVRSYSFGRKRVLSSNNILNDEDLLNLDSTFISSLKRLRSLKPEKSNLES 81

Query: 433 LPQDVLIKIVCGVDHDDLKMLFFVSKSIREATLIAKHSHFVYKTPRKTIGFPNAID--SD 606
           LPQD+LI+++CGVDHDDLK LF VSK IREATLIAK  HF Y TPRKT  F   ID  + 
Sbjct: 82  LPQDILIRVLCGVDHDDLKQLFHVSKVIREATLIAKEWHFAYSTPRKTQAFRTRIDFGNP 141

Query: 607 DSIEFIEVERAPKHVRIHKSKLNSKKLSDISVALFTPDGEEKWPRRELFMGMETEL 774
             ++ IE   APK  R +KS LN K ++D+SVALF        P++ LF  METE+
Sbjct: 142 SGLDEIEAPNAPKQRRSYKSLLNRKSIADVSVALFAS------PKKGLF--METEI 189


>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score =  137 bits (346), Expect = 4e-30
 Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 4/173 (2%)
 Frame = +1

Query: 220 MAWGAKRGYSFQGGNEGFGMGLVR-SSSFGRKRVALTSNAIMEI-DCLDKTPIKRQCSSE 393
           MA G + G   +GG+E  G+G    + S  RKR+ ++SN        + +TP+KR+C  E
Sbjct: 1   MALGRRHGSQMKGGDEELGLGFAPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRCG-E 59

Query: 394 ASVFTLDKSRLEELPQDVLIKIVCGVDHDDLKMLFFVSKSIREATLIAKHSHFVYKTPRK 573
                 +KS LE +PQD+LI+I+CGVDHDDLK LF VS +IR+ATLIAK SHF Y TP K
Sbjct: 60  MVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSK 119

Query: 574 TIGFPNAIDSDDSIEF--IEVERAPKHVRIHKSKLNSKKLSDISVALFTPDGE 726
              F + +D ++S  F  ++   APK  R  +S+L  +KLS I++ALF+ D E
Sbjct: 120 VQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRKLSGIAIALFSSDEE 172


>ref|XP_002274518.1| PREDICTED: F-box protein At1g61340-like [Vitis vinifera]
          Length = 172

 Score =  136 bits (343), Expect = 8e-30
 Identities = 77/173 (44%), Positives = 110/173 (63%), Gaps = 4/173 (2%)
 Frame = +1

Query: 220 MAWGAKRGYSFQGGNEGFGMGLVR-SSSFGRKRVALTSNAIMEI-DCLDKTPIKRQCSSE 393
           MA G + G   +GG+E  G+G V  + S  RKR+ ++SN        + +TP+KR+C  E
Sbjct: 1   MALGRRHGSQMKGGDEELGLGFVPVTRSLSRKRILVSSNTESSSPSSVLRTPLKRRCG-E 59

Query: 394 ASVFTLDKSRLEELPQDVLIKIVCGVDHDDLKMLFFVSKSIREATLIAKHSHFVYKTPRK 573
                 +KS LE +PQD+LI+I+CGVDHDDLK LF VS +IR+ATLIAK SHF + TP K
Sbjct: 60  MVEEKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDATLIAKKSHFAFSTPSK 119

Query: 574 TIGFPNAIDSDDSIEF--IEVERAPKHVRIHKSKLNSKKLSDISVALFTPDGE 726
              F + +D ++S  F  ++   APK  R  +S+L  ++LS I++ALF+ D E
Sbjct: 120 VQTFRSPLDPEESSGFDDLQTPDAPKQSRHFRSRLRGRRLSGIAIALFSSDEE 172


>ref|XP_004134730.1| PREDICTED: F-box protein SKIP27-like [Cucumis sativus]
          Length = 190

 Score =  135 bits (341), Expect = 1e-29
 Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 9/186 (4%)
 Frame = +1

Query: 220 MAWGAKRGYS-----FQGGNEGFGMGLVR-SSSFGRKRVALTSNAI-MEIDCLDKTPIKR 378
           MA G K G           ++G   G+VR +   GRKRV ++ +      D   K P KR
Sbjct: 1   MALGKKTGCLKSKSVVSAADKGLDFGVVRYTRGLGRKRVVISCHEEDSPTDLTPKAPSKR 60

Query: 379 QCSSEASVFTLDKSRLEELPQDVLIKIVCGVDHDDLKMLFFVSKSIREATLIAKHSHFVY 558
           +C+  ++    D+S LE LPQ++LI+++CGV+HDDLK L  VSK+I EATLIAK SHF Y
Sbjct: 61  RCNVVSTAVEDDRSLLEALPQEILIRVLCGVEHDDLKQLIRVSKTINEATLIAKDSHFAY 120

Query: 559 KTPRKTIGFPNAIDSDDSIEFIEVERAPK--HVRIHKSKLNSKKLSDISVALFTPDGEEK 732
            TP K   F  AI+ DDS +F E+E AP     R  ++ LN KKL++IS+ALF  + E++
Sbjct: 121 STPSKVRRFRTAIELDDSSDFDEIE-APNACPTRRFRTPLNRKKLAEISIALFAEE-EDQ 178

Query: 733 WPRREL 750
           WP+++L
Sbjct: 179 WPKKKL 184


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