BLASTX nr result

ID: Cephaelis21_contig00012893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012893
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20261.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...    78   9e-13
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]    77   1e-12
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...    66   3e-09
ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08

>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = -1

Query: 196 TFSEDLVLNVLKRLSSDWKPAYKFFKWVCEAKFPDGYSPGTGVYNAMLDILGRMHQFDKL 17
           + ++DLVL+VLKR  SDW+PAY FF W        GYSPG GV+N +LDILGRM +F ++
Sbjct: 115 SLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRRFHEM 174

Query: 16  CHLLE 2
             L +
Sbjct: 175 TQLFD 179


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15200-like [Vitis vinifera]
          Length = 546

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = -1

Query: 196 TFSEDLVLNVLKRLSSDWKPAYKFFKWVCEAKFPDGYSPGTGVYNAMLDILGRMHQFDKL 17
           + ++DLVL+VLKR  SDW+PAY FF W        GYSPG GV+N +LDILGRM +F ++
Sbjct: 115 SLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRRFHEM 174

Query: 16  CHLLE 2
             L +
Sbjct: 175 TQLFD 179


>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/65 (52%), Positives = 45/65 (69%)
 Frame = -1

Query: 196 TFSEDLVLNVLKRLSSDWKPAYKFFKWVCEAKFPDGYSPGTGVYNAMLDILGRMHQFDKL 17
           + ++DLVL+VLKR  SDW+PAY FF W        GYSPG GV+N +LDILGRM +F ++
Sbjct: 115 SLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEILDILGRMRRFHEM 174

Query: 16  CHLLE 2
             L +
Sbjct: 175 TQLFD 179


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 33/65 (50%), Positives = 43/65 (66%)
 Frame = -1

Query: 196 TFSEDLVLNVLKRLSSDWKPAYKFFKWVCEAKFPDGYSPGTGVYNAMLDILGRMHQFDKL 17
           T +EDL+L VLKR  SDWKPA  FF WV +         G+G YN +LDILG+M +FD+L
Sbjct: 77  TVTEDLILKVLKRHRSDWKPALIFFNWVSKG---GKVLMGSGAYNEILDILGKMRRFDEL 133

Query: 16  CHLLE 2
             +L+
Sbjct: 134 SQVLD 138


>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/63 (50%), Positives = 41/63 (65%)
 Frame = -1

Query: 190 SEDLVLNVLKRLSSDWKPAYKFFKWVCEAKFPDGYSPGTGVYNAMLDILGRMHQFDKLCH 11
           SE LV  VLKR S+DW PA+ FFKW   AK   GY      YN+M+DILG++ +FD +  
Sbjct: 118 SESLVEQVLKRFSNDWIPAFGFFKW---AKAQTGYRHSMNSYNSMVDILGKLKKFDLMWE 174

Query: 10  LLE 2
           L+E
Sbjct: 175 LVE 177


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