BLASTX nr result

ID: Cephaelis21_contig00012837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012837
         (1379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    85   5e-14
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    76   2e-11
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-11
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11
ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-10

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
 Frame = +1

Query: 727  LAVHWL-PPASPWKLNIDGSSRGNPGLAGAGLVIRDSSGSVLRAEAHFLGSLTSMQAESI 903
            + V+W+ PP    KLN DGS     G  G G ++R++ G V+ A    LG  TS  AE++
Sbjct: 988  IRVNWIKPPTMFAKLNTDGSCVN--GRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAM 1045

Query: 904  ALLRGLQLCSALHLQSVAVESDSHMLVDFCTSAFSVPWSCSSII*AAKALLPLHATSFIH 1083
            ++L G+QLC    +  +  E+DS +L    T  +S+PW     +   + ++  H     H
Sbjct: 1046 SMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINH 1105

Query: 1084 IYREANTVTDFLATTGSTSQ*SYVFTS-SSMPQKLRGLIFLNQIGCPNIR 1230
              REAN   D LA+   ++  ++VF S +++P  ++GL+ L+++  P  R
Sbjct: 1106 CLREANQPADKLASISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPTFR 1155


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 1/179 (0%)
 Frame = +1

Query: 709  RRISCPLAVHWLPPASPW-KLNIDGSSRGNPGLAGAGLVIRDSSGSVLRAEAHFLGSLTS 885
            +R++  L + W PP     K+N DGSS G       G+VIRDS+   L A +  +G+ T 
Sbjct: 43   KRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATP 102

Query: 886  MQAESIALLRGLQLCSALHLQSVAVESDSHMLVDFCTSAFSVPWSCSSII*AAKALLPLH 1065
            ++AE  A +  ++    + L  V +E+DS  +V+       VPW   +            
Sbjct: 103  LEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSI 162

Query: 1066 ATSFIHIYREANTVTDFLATTGSTSQ*SYVFTSSSMPQKLRGLIFLNQIGCPNIRVHHT 1242
            + S +HI RE N V D LA  G      Y    +S P  +  L+  +++G P  R+  T
Sbjct: 163  SCSCVHILREGNMVADALAKHGQGLSLYYTQLWTSPPPFIYHLLLRDRLGLPYTRIDVT 221


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
            predicted protein [Populus trichocarpa]
          Length = 245

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
 Frame = +1

Query: 763  KLNIDGSSRGNPGLAGAGLVIRDSSGSVLRAEAHFLGSLTSMQAESIALLRGLQLCSALH 942
            KLN+DG S+GNPG+AGAG VIRD  G+ +   A  +G  +S+ AE  A+  GLQL     
Sbjct: 85   KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144

Query: 943  LQSVAVESDSHMLVDFCTSAFSVPWSCSSII*AAKALLPLH-ATSFIHIYREANTVTDFL 1119
             + V +ESDS ++V              +II   K +L  +   +  H+YREAN V D+L
Sbjct: 145  FRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRNWEVTTYHVYREANCVADWL 204

Query: 1120 ATTGST 1137
            A  G T
Sbjct: 205  ANYGLT 210


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
            predicted protein [Populus trichocarpa]
          Length = 245

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 2/127 (1%)
 Frame = +1

Query: 763  KLNIDGSSRGNPGLAGAGLVIRDSSGSVLRAEAHFLGSLTSMQAESIALLRGLQLCSALH 942
            KLN+DG S+GNPG+AGAG VIRD  G+ +   A  +G  +S+ AE  A+  GLQL     
Sbjct: 85   KLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDRG 144

Query: 943  LQSVAVESDSHMLVDFCTSAFSVPWSCSSII*AAKALL--PLHATSFIHIYREANTVTDF 1116
             + V +ESDS ++V              +II   K +L      T++ H+YREAN V D+
Sbjct: 145  FRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIKGMLGRDWEVTTY-HVYREANCVADW 203

Query: 1117 LATTGST 1137
            LA  G T
Sbjct: 204  LANYGLT 210


>ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|222847134|gb|EEE84681.1|
            predicted protein [Populus trichocarpa]
          Length = 1221

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 5/138 (3%)
 Frame = +1

Query: 733  VHWLPPA-SPWKLNIDGSSRGNPGLAGAGLVIRDSSGSVLRAEAHFLGSLTSMQAESIAL 909
            V W PP    +K N+DGSS G PGL+G G V+R+  G +L   +  +G L S  AE  A+
Sbjct: 1075 VIWSPPTIGSFKWNVDGSSLGKPGLSGIGGVLRNHHGHLLGIFSLPVGILDSNIAELRAV 1134

Query: 910  LRGLQLCSA---LHLQSVAVESDSHMLVDFCTSAFSVPWSCSSII*AAKALLPLHAT-SF 1077
            ++ ++L ++   LH + + +ESDS  ++ +  +  + PW    +    + L     + +F
Sbjct: 1135 VKAVELSASNRLLHHKHITIESDSTNVISWMHNPHNRPWMHWELFSTVQRLTRFFGSITF 1194

Query: 1078 IHIYREANTVTDFLATTG 1131
             H+YRE+N + D +A  G
Sbjct: 1195 AHVYRESNNMADCMAKQG 1212


Top