BLASTX nr result

ID: Cephaelis21_contig00012833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012833
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281726.1| PREDICTED: double-strand break repair protei...   374   e-101
ref|XP_002525759.1| meiotic recombination repair protein, putati...   328   2e-87
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...   322   1e-85
ref|XP_004154884.1| PREDICTED: double-strand break repair protei...   313   7e-83
ref|XP_003539581.1| PREDICTED: double-strand break repair protei...   310   6e-82

>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis vinifera]
            gi|302143084|emb|CBI20379.3| unnamed protein product
            [Vitis vinifera]
          Length = 731

 Score =  374 bits (961), Expect = e-101
 Identities = 205/360 (56%), Positives = 251/360 (69%), Gaps = 5/360 (1%)
 Frame = +1

Query: 1    GYMTINPQRFGQKYVGKVANPQDILIFSKASRSGRREAKLDDSERLRPEELNQQNIEALV 180
            G+MTINPQRFGQKYVGKVANPQDILIF+KASR GR EAK+DDSERLRPEELNQQNIEALV
Sbjct: 374  GFMTINPQRFGQKYVGKVANPQDILIFTKASRKGRSEAKIDDSERLRPEELNQQNIEALV 433

Query: 181  AEHNLKMEILPVNDLDIALHNFVNKDDKMAFYSCVRYNIEETRNKIARDSDCLKLDENDV 360
            AE+NLKMEILPVNDLD+ALHNFVNKDDKMAFYSCV+YN+EETR+KIARDSD LK +E D+
Sbjct: 434  AENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLEETRSKIARDSDPLKFEEEDL 493

Query: 361  ILKVEESLQERVKARATQTKDNQQFTFSGQSLDEHRNTGDA--GTAMSFSDDEDATLLSS 534
            ILKV E L+ERVK R+  +K+  QF  S +SL+  R+ G A  G+A+SFSDDED T LS 
Sbjct: 494  ILKVGECLEERVKERSVHSKETPQFMSSARSLENIRSKGTAETGSAVSFSDDEDPTQLSG 553

Query: 535  SKSRARGQKGSFESFRSPHDTSD--LGKTXXXXXXXXXXXXXXXDNLKQTTLDAAMGFXX 708
            SKS  RG+KGS  +F+S HD S+   GK+                 LKQ TLD+++GF  
Sbjct: 554  SKSATRGRKGSSATFKSSHDASEQGKGKSSTRGRGRGRGRGRSSSTLKQMTLDSSLGFRH 613

Query: 709  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-PHIANDIDNNSDEDETHRGKGRKRAAPM 885
                                          A  +  N++D++S+ DE  +GKGRKRAAP 
Sbjct: 614  SERSASVAATAAVRNLADDEDNVESSSSDEAGKYGINEVDDSSENDENLQGKGRKRAAPR 673

Query: 886  GRGRGSTTASKRGRRSENTSSSLQKLLMSRXXXXXXXXXMTKKKTTSNLRATRNYGALRR 1065
            GRGRG+TT+SKRGR+S++T  S+Q++LM++         M+K+      R TRNYGALRR
Sbjct: 674  GRGRGATTSSKRGRKSDST--SIQRMLMNKDDDDDDEDDMSKRLNKPQPRVTRNYGALRR 731


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
            gi|223534909|gb|EEF36595.1| meiotic recombination repair
            protein, putative [Ricinus communis]
          Length = 765

 Score =  328 bits (841), Expect = 2e-87
 Identities = 182/336 (54%), Positives = 227/336 (67%), Gaps = 11/336 (3%)
 Frame = +1

Query: 1    GYMTINPQRFGQKYVGKVANPQDILIFSKASRSGRREAKLDDSERLRPEELNQQNIEALV 180
            G+MTINPQRFGQKYVGKVANPQDILIFSKASR G+ +AK+DDSERLRPEELNQQNIEALV
Sbjct: 374  GFMTINPQRFGQKYVGKVANPQDILIFSKASRKGQGQAKIDDSERLRPEELNQQNIEALV 433

Query: 181  AEHNLKMEILPVNDLDIALHNFVNKDDKMAFYSCVRYNIEETRNKIARDSDCLKLDENDV 360
            AE NLKMEILPVNDLD+ALHNFVNKDDKMAFYSCV+YN++ETRNKIA+DSD +K ++ D+
Sbjct: 434  AESNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLQETRNKIAKDSDTIKFEKEDI 493

Query: 361  ILKVEESLQERVKARATQTKDNQQFTFSGQSLDEHRNTGDA--GTAMSFSDDEDATLLSS 534
            ILKV E L+ERVK R+  +KD  Q + S  S+++ R+ G A  G+A+SFSDDED T LS 
Sbjct: 494  ILKVGECLEERVKERSMHSKDAPQISSSAHSIEDFRSIGTAGVGSAVSFSDDEDTTQLSG 553

Query: 535  SKSRARGQKGSFESFRSPHD---------TSDLGKTXXXXXXXXXXXXXXXDNLKQTTLD 687
            SK+ +R QKGS    R  +D         TS  G+                +NLKQTTLD
Sbjct: 554  SKASSRNQKGSRLVSRPSYDDASEADKGKTSTRGRGRGRGRGRGRGRGRGSNNLKQTTLD 613

Query: 688  AAMGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHIANDIDNNSDEDETHRGKGR 867
             ++GF                                A +  N++ ++SD+ E   GKG 
Sbjct: 614  VSLGFRQSQRSASVAATAAVRSIADEEENVESASSEDAENRINEVGDSSDDAERIPGKGG 673

Query: 868  KRAAPMGRGRGSTTASKRGRRSENTSSSLQKLLMSR 975
            KRAAP+GRGRG    SKRG++S+N  S++Q++LM +
Sbjct: 674  KRAAPIGRGRGG--PSKRGKKSDN--SAIQRMLMGK 705


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
            predicted protein [Populus trichocarpa]
          Length = 772

 Score =  322 bits (825), Expect = 1e-85
 Identities = 181/331 (54%), Positives = 227/331 (68%), Gaps = 6/331 (1%)
 Frame = +1

Query: 1    GYMTINPQRFGQKYVGKVANPQDILIFSKASRSGRREAKLDDSERLRPEELNQQNIEALV 180
            G+MTINPQRFGQKYVGKVANPQDILIFSKAS+ GR EAK DD+ERLRPEELNQQNIEALV
Sbjct: 374  GFMTINPQRFGQKYVGKVANPQDILIFSKASKKGRNEAKFDDTERLRPEELNQQNIEALV 433

Query: 181  AEHNLKMEILPVNDLDIALHNFVNKDDKMAFYSCVRYNIEETRNKIARDSDCLKLDENDV 360
            AE+NLKMEILPVNDLD+ALHNFV+KDDKMAFY+CV+YN++ETR+KIA+DSD +K ++ D+
Sbjct: 434  AENNLKMEILPVNDLDVALHNFVSKDDKMAFYACVQYNLQETRSKIAKDSDTMKFEDEDL 493

Query: 361  ILKVEESLQERVKARATQTKDNQQFTFSGQSLDEHRNT-GDAGTAMSFSDDEDATLLSSS 537
            ILK      ERVK R+  + D  QFT   QS+++ R+T    G+A+SFSD+EDA  +S S
Sbjct: 494  ILK------ERVKERSVHSTDAAQFTSGAQSMEDFRSTSAGVGSAVSFSDEEDAAQISGS 547

Query: 538  KSRARGQKGSFESFRSPHDTSDL--GKTXXXXXXXXXXXXXXXDNLKQTTLDAAMGFXXX 711
             S  RG+KGS    RS HD S+   GKT                NLKQTTLDA +GF   
Sbjct: 548  TSTTRGRKGSRVGSRSSHDVSETGKGKTSARGRGRGRGRGRGSSNLKQTTLDATLGFRQS 607

Query: 712  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHIA-NDIDNNSDEDET--HRGKGRKRAAP 882
                                         +  +  N++ ++S++DE+   +GKGRKRAA 
Sbjct: 608  QRSASVSATAAVRSIAVEDENVDSASSEDSKKLGMNEVADSSNDDESIQGKGKGRKRAAA 667

Query: 883  MGRGRGSTTASKRGRRSENTSSSLQKLLMSR 975
             GRGRG+ T SKRGR+SEN  S+LQ++LM++
Sbjct: 668  RGRGRGA-TPSKRGRKSEN--SALQRMLMNK 695


>ref|XP_004154884.1| PREDICTED: double-strand break repair protein MRE11-like [Cucumis
            sativus]
          Length = 739

 Score =  313 bits (801), Expect = 7e-83
 Identities = 197/380 (51%), Positives = 233/380 (61%), Gaps = 25/380 (6%)
 Frame = +1

Query: 1    GYMTINPQRFGQKYVGKVANPQDILIFSKASRSGRREAKLDDSERLRPEELNQQNIEALV 180
            G+MTINPQRFGQKYVGKVANPQDILIFSKASR GR E K+DDSERLRPEELNQQNIEALV
Sbjct: 374  GFMTINPQRFGQKYVGKVANPQDILIFSKASRKGRNEVKIDDSERLRPEELNQQNIEALV 433

Query: 181  AEHNLKMEILPVNDLDIALHNFVNKDDKMAFYSCVRYNIEETRNKIARDSDCLKLDENDV 360
            AE+NLKMEILPVNDLD+ALHNFVNKDDKMAFYSCV+YN+EETRNKI+ D+D LK +E D+
Sbjct: 434  AENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCVQYNLEETRNKISHDADSLKFEEEDL 493

Query: 361  ILKVEESLQE---------------------RVKARATQTKDNQQFTFSGQSLDE--HRN 471
            ILKV E L+E                     RVK R T +K++  FT S QS  +   R+
Sbjct: 494  ILKVGECLEESPSFSFSSLPPSLSFSHDALDRVKERNTHSKNDTVFTSSIQSSKDFGSRS 553

Query: 472  TGDAGTAMSFSDDEDATLLSSSKSRARGQKGSFESFRSPHDTSDLGKTXXXXXXXXXXXX 651
            +   G+A+SFSDDEDA   S SKS  RG+K    S R+  DTS    T            
Sbjct: 554  SMTVGSAVSFSDDEDAAKTSGSKS-TRGRK---VSSRAAEDTSTKTST---RGRGRGRGR 606

Query: 652  XXXDNLKQTTLDAAMGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHIANDIDNN 831
                +LKQTTLDAA+GF                                  +   +I+++
Sbjct: 607  GSSSSLKQTTLDAALGF----RKSQRSATAAVQSIVNTDAMNSASSGEARENEVEEINDS 662

Query: 832  SDEDETHRGKGRKRAAPMGRGRGSTTASKRGRRSENTSSSLQKLLMSRXXXXXXXXXMTK 1011
            S+ DE+   KGRKR AP GRGRGS T SKRGR+S+N  S +Q+  +SR            
Sbjct: 663  SENDESLLSKGRKRTAPRGRGRGS-TQSKRGRKSDN--SLVQRTFISRDNDDDSEDEDNA 719

Query: 1012 KK--TTSNLRATRNYGALRR 1065
            +K    S  R TRNYGALRR
Sbjct: 720  RKLLNKSQPRVTRNYGALRR 739


>ref|XP_003539581.1| PREDICTED: double-strand break repair protein MRE11-like [Glycine
            max]
          Length = 714

 Score =  310 bits (793), Expect = 6e-82
 Identities = 180/358 (50%), Positives = 224/358 (62%), Gaps = 3/358 (0%)
 Frame = +1

Query: 1    GYMTINPQRFGQKYVGKVANPQDILIFSKASRSGRREAKLDDSERLRPEELNQQNIEALV 180
            G+MTINPQRFGQKYVGKVANPQDILIFSKA++  + E K+DDSERLRPEELNQQNIEALV
Sbjct: 371  GFMTINPQRFGQKYVGKVANPQDILIFSKATKRAKVEGKIDDSERLRPEELNQQNIEALV 430

Query: 181  AEHNLKMEILPVNDLDIALHNFVNKDDKMAFYSCVRYNIEETRNKIARDSDCLKLDENDV 360
            AE NLKMEILPVNDLDIAL NFVNKDDKMAFYSCV+YNIEETRNK+A+DSD +K +E D+
Sbjct: 431  AESNLKMEILPVNDLDIALQNFVNKDDKMAFYSCVKYNIEETRNKLAKDSDNVKFEEEDL 490

Query: 361  ILKVEESLQERVKARATQTKDNQQFTFSGQSLDEHRNTGDAGT--AMSFSDDEDATLLSS 534
            I+KV E L+ERVK R+  +K+  Q T   Q   + +    AGT  A+SFSDDEDA  +SS
Sbjct: 491  IVKVGECLEERVKERSVHSKEPTQLTADAQPWKDFQGRSAAGTGSAVSFSDDEDAMPVSS 550

Query: 535  SKSRARGQKGSFESFRSPHDTSDLGKTXXXXXXXXXXXXXXXDNLKQTTLDAAMGFXXXX 714
            SK   RG+KGS          S   +T                 +KQTT+D A+GF    
Sbjct: 551  SKPSTRGRKGS----------SGASQTTTRGRGRGRGRGRGSSTMKQTTIDGALGFRVSQ 600

Query: 715  XXXXXXXXXXXXXXXXXXXXXXXXXXXXAPHIANDIDNNSDEDETHRGKGRKRAAPMGRG 894
                                          +   +ID++S+ +      G+KRAA  GRG
Sbjct: 601  RSASVAAATAIRSGADDDNLASASSDDANKNDVEEIDDSSENESNL--PGQKRAASKGRG 658

Query: 895  RGSTTASKRGRRSENTSSSLQKLLMSR-XXXXXXXXXMTKKKTTSNLRATRNYGALRR 1065
            RGST +SKRGR+S+N  SS+ ++L++           + K+   S  R T++YGALRR
Sbjct: 659  RGSTQSSKRGRKSDN--SSIHRMLVNNDDDDDDDDTDIRKRLNKSQPRVTKSYGALRR 714


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