BLASTX nr result

ID: Cephaelis21_contig00012767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012767
         (1833 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28417.3| unnamed protein product [Vitis vinifera]              100   1e-18
ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249...   100   1e-18
emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CA...    90   2e-15
ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780...    90   2e-15
ref|XP_004165867.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    89   5e-15

>emb|CBI28417.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  100 bits (249), Expect = 1e-18
 Identities = 62/122 (50%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
 Frame = -2

Query: 1706 SPGTRRTNHG-RKDQIANERSNIGRRFTLTSYADVDDSLASPKTPLQ------NCNAIPN 1548
            SP T+R N   RKD+      N+G+               SP TPL       N N+IPN
Sbjct: 3    SPATKRPNFSSRKDR------NLGQAVP-----------NSPITPLTENRRSLNENSIPN 45

Query: 1547 RPSTSTPTPWASRLSVLARIPPVKRSEKTEDVDLIQPVYVGEFLQVLRDEQQATLLTKQV 1368
            RPST TP PW SRLSV ARIP +K+SEK +++D +QPVYVGEF QV+RDE QA+ L K+V
Sbjct: 46   RPSTGTPAPWTSRLSVYARIPQLKKSEKGDEIDPVQPVYVGEFPQVVRDE-QASFLQKRV 104

Query: 1367 PG 1362
            PG
Sbjct: 105  PG 106


>ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249432 isoform 1 [Vitis
            vinifera]
          Length = 1330

 Score =  100 bits (249), Expect = 1e-18
 Identities = 62/122 (50%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
 Frame = -2

Query: 1706 SPGTRRTNHG-RKDQIANERSNIGRRFTLTSYADVDDSLASPKTPLQ------NCNAIPN 1548
            SP T+R N   RKD+      N+G+               SP TPL       N N+IPN
Sbjct: 3    SPATKRPNFSSRKDR------NLGQAVP-----------NSPITPLTENRRSLNENSIPN 45

Query: 1547 RPSTSTPTPWASRLSVLARIPPVKRSEKTEDVDLIQPVYVGEFLQVLRDEQQATLLTKQV 1368
            RPST TP PW SRLSV ARIP +K+SEK +++D +QPVYVGEF QV+RDE QA+ L K+V
Sbjct: 46   RPSTGTPAPWTSRLSVYARIPQLKKSEKGDEIDPVQPVYVGEFPQVVRDE-QASFLQKRV 104

Query: 1367 PG 1362
            PG
Sbjct: 105  PG 106


>emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CAI64811.1| nucleoporin
            [Lotus japonicus]
          Length = 1309

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 52/114 (45%), Positives = 65/114 (57%)
 Frame = -2

Query: 1706 SPGTRRTNHGRKDQIANERSNIGRRFTLTSYADVDDSLASPKTPLQNCNAIPNRPSTSTP 1527
            S GT++ N   +DQ                 A     L SP TP    +A+PNRP T TP
Sbjct: 3    SCGTKKNNGASRDQ-----------------ARASSVLDSPVTPPLRSSAVPNRPPTGTP 45

Query: 1526 TPWASRLSVLARIPPVKRSEKTEDVDLIQPVYVGEFLQVLRDEQQATLLTKQVP 1365
             PW  RLSVLAR+P V R+ K ++ D I+PV+V EF QV+RDE QA LL K+VP
Sbjct: 46   APWTPRLSVLARVPQVNRTGKEDNTDPIKPVFVAEFPQVVRDE-QAALLHKRVP 98


>ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780148 [Glycine max]
          Length = 1315

 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 48/97 (49%), Positives = 63/97 (64%)
 Frame = -2

Query: 1655 ERSNIGRRFTLTSYADVDDSLASPKTPLQNCNAIPNRPSTSTPTPWASRLSVLARIPPVK 1476
            ++SN+  R      + V DS  +P     + N +PNRP+T TP PWA RLSVLAR+P V 
Sbjct: 7    KKSNVRSRRLQGRDSTVVDSPVTPARTSFHDNGVPNRPTTGTPAPWAPRLSVLARVPQVN 66

Query: 1475 RSEKTEDVDLIQPVYVGEFLQVLRDEQQATLLTKQVP 1365
            RS K +D D  +PV+VGEF QV+RDEQ   LL K++P
Sbjct: 67   RSGKGDDTDPTKPVFVGEFPQVVRDEQN-ILLHKRIP 102


>ref|XP_004165867.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101211181 [Cucumis
            sativus]
          Length = 1323

 Score = 88.6 bits (218), Expect = 5e-15
 Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
 Frame = -2

Query: 1655 ERSNIGRRFTLTSYADVD-DSLASPKTPLQNC---NAIPNRPSTSTPTPWASRLSVLARI 1488
            +R N+  R   TS      DS  +P + ++N    N +PNRP T TP PWA RLSVLARI
Sbjct: 7    KRRNLSSRTDRTSAPPTQSDSPITPLSAIRNPPLGNLVPNRPGTGTPAPWAPRLSVLARI 66

Query: 1487 PPVKRSEKTEDVDLIQPVYVGEFLQVLRDEQQATL 1383
             PV RS+K ++ D ++PVYVGEF QV+RDEQ + +
Sbjct: 67   SPVNRSDKEDETDPVKPVYVGEFPQVVRDEQASLI 101


Top