BLASTX nr result

ID: Cephaelis21_contig00012724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012724
         (1865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subuni...    62   5e-07
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni...    62   5e-07
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]    62   5e-07
ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago...    60   2e-06
ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subuni...    60   2e-06

>ref|XP_003554206.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = -2

Query: 1099 RETYKGQQYSNIYYARLHLIKTLLYSLLPNMKPNVP 992
            +ETY+GQQYS IY+ARLHL++TLLYSL+P+ KPN P
Sbjct: 21   KETYQGQQYSQIYFARLHLMRTLLYSLIPHWKPNSP 56


>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
            gi|297739835|emb|CBI30017.3| unnamed protein product
            [Vitis vinifera]
          Length = 439

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 24/36 (66%), Positives = 34/36 (94%)
 Frame = -2

Query: 1099 RETYKGQQYSNIYYARLHLIKTLLYSLLPNMKPNVP 992
            +ETY+GQQYS IY+ARLH+++TL+YSL+PN KP++P
Sbjct: 27   KETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLP 62


>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
          Length = 439

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 24/36 (66%), Positives = 34/36 (94%)
 Frame = -2

Query: 1099 RETYKGQQYSNIYYARLHLIKTLLYSLLPNMKPNVP 992
            +ETY+GQQYS IY+ARLH+++TL+YSL+PN KP++P
Sbjct: 27   KETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLP 62


>ref|XP_003625260.1| DNA polymerase delta small subunit [Medicago truncatula]
            gi|355500275|gb|AES81478.1| DNA polymerase delta small
            subunit [Medicago truncatula]
          Length = 454

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -2

Query: 1099 RETYKGQQYSNIYYARLHLIKTLLYSLLPNMKPNVP 992
            +E Y+GQQYS IY+ARLHL++TLLYSL+P+ KPN P
Sbjct: 23   KEMYRGQQYSQIYFARLHLMRTLLYSLVPHWKPNTP 58


>ref|XP_003521214.1| PREDICTED: DNA polymerase delta small subunit-like [Glycine max]
          Length = 433

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -2

Query: 1099 RETYKGQQYSNIYYARLHLIKTLLYSLLPNMKPNVP 992
            +E Y+GQQYS IY+ARLHL++TLLYSL+P+ KPN P
Sbjct: 21   KEAYQGQQYSQIYFARLHLMRTLLYSLVPHWKPNFP 56


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