BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012639
         (2912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...  1156   0.0  
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...  1117   0.0  
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...  1056   0.0  
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ...   989   0.0  
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar...   976   0.0  

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Vitis vinifera]
            gi|297745081|emb|CBI38673.3| unnamed protein product
            [Vitis vinifera]
          Length = 900

 Score = 1156 bits (2991), Expect = 0.0
 Identities = 568/891 (63%), Positives = 698/891 (78%), Gaps = 9/891 (1%)
 Frame = +2

Query: 86   VVRPFSSLQPIKVSHVETEFSDDIESSFVDNVISESNDDVGSKSLDSESLNFGGSSRKRG 265
            ++  F+ ++PI +S +E E  D  +S+ V + I   N D GS++L  ES NF        
Sbjct: 28   IINSFARVKPINISRLEAESWDTSDSNSVVDNIKTWNKDSGSENLILESSNFRND----- 82

Query: 266  VSVWKRFRVVKK---GENNNKAKEVENGITTYRGDIFNSWLDNKTTANFD------VWNL 418
              +W+R + VK+    + N+K + + N          N   + K+  +FD       + +
Sbjct: 83   --IWRRVQGVKRVRRRDPNSKFRSIRND---------NGHEEQKSVNHFDDEIDVNEYGI 131

Query: 419  ESELSLDRCNVLLKQLERSSDDKALGFFEWMRINGKLKWNLNAYNLIFRVLGRRGDWHRA 598
              ELS++RCN +LK LER SD K + FFEWMR NGKL+ N++AYNL  RVLGRRGDW  A
Sbjct: 132  GPELSVERCNAILKGLERCSDSKTMKFFEWMRENGKLEGNVSAYNLALRVLGRRGDWDAA 191

Query: 599  EKMIREITADSGCELKCQIFNTIIYACHKRGLTDLGAKWFRMMLDNGVRPNIATFGMLMS 778
            E MI E+  DS C++  Q++NT+IYAC+K+G  +LG KWFR+ML+NGVRPN+ATFGM+MS
Sbjct: 192  ETMIWEMNGDSDCQVNFQVYNTLIYACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMS 251

Query: 779  LYQRSWRVEPAEFAFSKMRDLNIVCHSAYSAMITIYTRMGLYDRAEEVIGFLRXXXXXXX 958
            LYQ+ W V  +E+AFS+MR   I C SAYSAMITIYTRM LYD+AEEVI F++       
Sbjct: 252  LYQKGWNVADSEYAFSQMRSFGITCQSAYSAMITIYTRMSLYDKAEEVIDFIQEDKVILN 311

Query: 959  XXXXXXXXXAYSQQGKLDEAEEVLLSMGSAGFSPNIVAYNTLITGYGKVSNMDAAQRLCH 1138
                     AYSQQGKL EAE VL SM +AGFSPNIVAYN LITGYGK SNMDAAQ +  
Sbjct: 312  LENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFR 371

Query: 1139 ELGNVGLEPDETTCRSMIEGWGRVNNYKEAKWYYAKLKRLGFMPNSSNLFTMINLQAKHK 1318
             L NVGLEPDE+T RSMIEGWGR  NYKEA+WYY +LKRLGF PNSSNL+TMINLQAK+ 
Sbjct: 372  NLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGFKPNSSNLYTMINLQAKYA 431

Query: 1319 DEEGVLRTIDDMMKIGCQKSSVLGIVLQVYEKAERFEKVPHILKGSLYDHVLKNQTSCSV 1498
            D E   RT+DDM +IGCQ SSVLG +LQ YE+A R ++VP ILKGS Y++VL NQTSCS+
Sbjct: 432  DGEDAARTLDDMKRIGCQYSSVLGTLLQAYERAGRIDRVPLILKGSFYEYVLVNQTSCSI 491

Query: 1499 LVLAYVKNCLISDALRVLEEKQWQDSVFEDNLYHLLICTCKELGHLESAIKIFTFMPKSI 1678
            LV+AYVK+CL+ DA++VL+EKQW+D++FEDNLYHL+IC+CKELG LE+A+KI++ MP   
Sbjct: 492  LVMAYVKHCLVDDAIKVLQEKQWKDTIFEDNLYHLVICSCKELGRLENAVKIYSQMPN-- 549

Query: 1679 EKPNLHISCTLIDIFSTMGLFDEAENLYLKLKESDIGLDVIAFSVVIRMYAKSGCFEKAC 1858
            +KPNLHI CT+IDI+ST+G F +AENLYLKLK S+I LD+IAFS+V+RMY KSG  + AC
Sbjct: 550  KKPNLHIMCTMIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDAC 609

Query: 1859 LVLEAMEKQKNLVADVYLLRDMFRIYQRCGMLYKLKDLYYRTLKTGIIWDQEMYNCVINC 2038
             VLE M++QKN+V D+YL  DM RIYQ+CGML KL+DLYYR LKTG+ WD EMYNCVINC
Sbjct: 610  SVLETMDEQKNIVPDIYLFCDMLRIYQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINC 669

Query: 2039 CARALPVDELSKLFDEMLQHGFAPNVITINVMLDVYGRSGLFKRAWKVFWMAKKRGLIDV 2218
            CARALPVDELS+LFDEML HGFAPN IT+NVMLDVYG+S LFK+A KV W+A+KRGL+DV
Sbjct: 670  CARALPVDELSRLFDEMLLHGFAPNTITLNVMLDVYGKSRLFKKARKVLWLARKRGLVDV 729

Query: 2219 VSYNTMIAAYGQNKDFKNMSETVKKMQFNGFSVSLEAYNCMLDAYGKKGEMEKFRNVLQR 2398
            +SYNT+IAAYGQ+KD K M  TV++MQFNGFSVSLE YNCMLD+YGK+G++E FR+VL+R
Sbjct: 730  ISYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRR 789

Query: 2399 LRDSSCVSDCYTYNIMINIYGEQRWIEELSDVLTELEALEIGLDLCGYNTLIKAYGIAGM 2578
            +++SSC SD YTYNIMINIYGEQ WIEE+++VLTEL+   +G DLC YNTLIKAYGIAGM
Sbjct: 790  MKESSCASDHYTYNIMINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTLIKAYGIAGM 849

Query: 2579 VEEAVGLVKEMREKGIEPDQVTYINLINALRKNDMFLEAVKWSLWMKQMGL 2731
            VE+AV LVKEMRE GI+PD++TYINLINALRKND FLEAVKWSLWMKQMGL
Sbjct: 850  VEDAVVLVKEMRENGIQPDRITYINLINALRKNDEFLEAVKWSLWMKQMGL 900



 Score = 74.3 bits (181), Expect = 2e-10
 Identities = 51/247 (20%), Positives = 107/247 (43%), Gaps = 1/247 (0%)
 Frame = +2

Query: 2012 EMYNCVINCCARALPVDELSKLFDEMLQHGFAPNVITINVMLDVYGRSGLFKRAWKVFWM 2191
            ++YN +I  C +   V+  +K F  ML++G  PNV T  +++ +Y      ++ W V   
Sbjct: 209  QVYNTLIYACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMSLY------QKGWNV--- 259

Query: 2192 AKKRGLIDVVSYNTMIAAYGQNKDFKNMSETVKKMQFNGFSVSLE-AYNCMLDAYGKKGE 2368
                                               Q   F ++ + AY+ M+  Y +   
Sbjct: 260  ---------------------------ADSEYAFSQMRSFGITCQSAYSAMITIYTRMSL 292

Query: 2369 MEKFRNVLQRLRDSSCVSDCYTYNIMINIYGEQRWIEELSDVLTELEALEIGLDLCGYNT 2548
             +K   V+  +++   + +   + +++N Y +Q  ++E   VL  ++      ++  YN 
Sbjct: 293  YDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNM 352

Query: 2549 LIKAYGIAGMVEEAVGLVKEMREKGIEPDQVTYINLINALRKNDMFLEAVKWSLWMKQMG 2728
            LI  YG A  ++ A  + + ++  G+EPD+ TY ++I    + + + EA  +   +K++G
Sbjct: 353  LITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLG 412

Query: 2729 LSGQ*NN 2749
                 +N
Sbjct: 413  FKPNSSN 419


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score = 1117 bits (2888), Expect = 0.0
 Identities = 561/906 (61%), Positives = 687/906 (75%), Gaps = 7/906 (0%)
 Frame = +2

Query: 35   PFSISLFPGCLHISGACVVRPFSSLQPIKVSHVETEFSDDIESSFVDNVISESNDDVGSK 214
            PFSIS         GAC++   ++  P+KVS +ETE  +D      D V+S SND     
Sbjct: 69   PFSIS---SSTPSPGACIITTLTTFSPVKVSRIETELFED------DVVLSTSND----- 114

Query: 215  SLDSESLNFGGSSR----KRGVSVWKRFRVVKKGENNN--KAKEVENGITTYRGDIFNSW 376
             L  E +N G   R    KR +    R    K+G+     K     NGI     D+F   
Sbjct: 115  -LPHECINEGLIDRNPNSKREIRKKYRGGAKKRGKRKVGFKFNYKRNGIEQEIEDLFVE- 172

Query: 377  LDNKTTANFDVWNLESELSLDRCNVLLKQLER-SSDDKALGFFEWMRINGKLKWNLNAYN 553
               +   N+ V  +   LSL+ CN++LK+LER SSDDK+L FFEWMR NGKL+ NLNAYN
Sbjct: 173  -GGELDVNYSV--IHCNLSLEHCNLILKRLERCSSDDKSLRFFEWMRNNGKLEKNLNAYN 229

Query: 554  LIFRVLGRRGDWHRAEKMIREITADSGCELKCQIFNTIIYACHKRGLTDLGAKWFRMMLD 733
            +I RVLGRR DW  AE+MI E++   G EL  ++FNT+IYAC +RG   LG KWFRMML+
Sbjct: 230  VILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTLIYACSRRGNMLLGGKWFRMMLE 289

Query: 734  NGVRPNIATFGMLMSLYQRSWRVEPAEFAFSKMRDLNIVCHSAYSAMITIYTRMGLYDRA 913
             GV+PNIATFGMLM LYQ+ W VE AEF FSKMR   I+C SAYSAMITIYTR+ LY++A
Sbjct: 290  LGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIICQSAYSAMITIYTRLSLYNKA 349

Query: 914  EEVIGFLRXXXXXXXXXXXXXXXXAYSQQGKLDEAEEVLLSMGSAGFSPNIVAYNTLITG 1093
            EE+IG +                 AYSQQG+L+EAE+VL+ M  A FSPNIVA+NTLITG
Sbjct: 350  EEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLVEMQEASFSPNIVAFNTLITG 409

Query: 1094 YGKVSNMDAAQRLCHELGNVGLEPDETTCRSMIEGWGRVNNYKEAKWYYAKLKRLGFMPN 1273
            YGK+SNM AAQRL  ++ N GLEPDETT RSMIEGWGR  NYKEA+WYY +LKRLG+MPN
Sbjct: 410  YGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGRTGNYKEAEWYYKELKRLGYMPN 469

Query: 1274 SSNLFTMINLQAKHKDEEGVLRTIDDMMKIGCQKSSVLGIVLQVYEKAERFEKVPHILKG 1453
            SSNL+T+INLQAKH D+EG + T+DDM+KIGCQ SS+LG +L+ YEKA R  KVP +LK 
Sbjct: 470  SSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSILGTLLKAYEKAGRINKVPLLLKD 529

Query: 1454 SLYDHVLKNQTSCSVLVLAYVKNCLISDALRVLEEKQWQDSVFEDNLYHLLICTCKELGH 1633
            S Y HVL NQTSCS+LV+ YVKNCL+ +AL+VL +K+W+D  FEDNLYHLLIC+CKELG+
Sbjct: 530  SFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKWKDQTFEDNLYHLLICSCKELGN 589

Query: 1634 LESAIKIFTFMPKSIEKPNLHISCTLIDIFSTMGLFDEAENLYLKLKESDIGLDVIAFSV 1813
            LESA++I+T MPKS +KPNLHISCT+IDI+S +G F EAE LY +LK S I LD++AFS+
Sbjct: 590  LESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAEAEKLYQQLKCSGIALDMVAFSI 649

Query: 1814 VIRMYAKSGCFEKACLVLEAMEKQKNLVADVYLLRDMFRIYQRCGMLYKLKDLYYRTLKT 1993
            V+RMY K+G  + AC VL  MEKQ+N++ D+YL RDM RIYQ+CGM+ KLKDLY++ LK+
Sbjct: 650  VVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDMLRIYQQCGMMSKLKDLYHKILKS 709

Query: 1994 GIIWDQEMYNCVINCCARALPVDELSKLFDEMLQHGFAPNVITINVMLDVYGRSGLFKRA 2173
             + WDQE+YNC+INCCARALPV ELS+LF EMLQ GF+PN IT NVMLDVYG++ LF +A
Sbjct: 710  EVDWDQELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKA 769

Query: 2174 WKVFWMAKKRGLIDVVSYNTMIAAYGQNKDFKNMSETVKKMQFNGFSVSLEAYNCMLDAY 2353
             ++FWMA+KRGL+DV+SYNT+IAAYG NKDFKNM+  V+ MQF+GFSVSLEAYNCMLD Y
Sbjct: 770  KELFWMARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGFSVSLEAYNCMLDGY 829

Query: 2354 GKKGEMEKFRNVLQRLRDSSCVSDCYTYNIMINIYGEQRWIEELSDVLTELEALEIGLDL 2533
            GK+G+ME FRNVLQR++ SS  SD YTYNIMINIYGEQ WI+E++ VLTEL    +  DL
Sbjct: 830  GKEGQMECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTELRECGLRPDL 889

Query: 2534 CGYNTLIKAYGIAGMVEEAVGLVKEMREKGIEPDQVTYINLINALRKNDMFLEAVKWSLW 2713
            C YNTLIKAYG+AGMVE+A+ LVKEMRE GIEPD++TY NLI AL+KND +LEAVKWSLW
Sbjct: 890  CSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKNDKYLEAVKWSLW 949

Query: 2714 MKQMGL 2731
            MKQ+GL
Sbjct: 950  MKQLGL 955


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Cucumis sativus]
          Length = 894

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 524/888 (59%), Positives = 667/888 (75%), Gaps = 1/888 (0%)
 Frame = +2

Query: 65   LHISGACVVRPFSSL-QPIKVSHVETEFSDDIESSFVDNVISESNDDVGSKSLDSESLNF 241
            LH++ + ++   + + +P KVS VE + SD  +S F D +++                  
Sbjct: 40   LHLNKSSIIYSLARVHKPSKVSQVEQDASDVSQSRF-DEIVAR----------------- 81

Query: 242  GGSSRKRGVSVWKRFRVVKKGENNNKAKEVENGITTYRGDIFNSWLDNKTTANFDVWNLE 421
                        K++   KK      +K       ++  +  ++ L N    + +   + 
Sbjct: 82   ------------KKYFTSKK-----PSKRAAGSHFSFSRNCNDNILFNGGELDVNYSTIS 124

Query: 422  SELSLDRCNVLLKQLERSSDDKALGFFEWMRINGKLKWNLNAYNLIFRVLGRRGDWHRAE 601
            S+LSL+ CN +LK+LE+ +D K LGFFEWMR NGKLK N++AYNL+ RVLGR+ DW  AE
Sbjct: 125  SDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGKLKHNVSAYNLVLRVLGRQEDWDAAE 184

Query: 602  KMIREITADSGCELKCQIFNTIIYACHKRGLTDLGAKWFRMMLDNGVRPNIATFGMLMSL 781
            K+I E+ A+ G +L  Q+FNT+IYAC+K    + G KWFRMML+  V+PN+ATFGMLM L
Sbjct: 185  KLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGL 244

Query: 782  YQRSWRVEPAEFAFSKMRDLNIVCHSAYSAMITIYTRMGLYDRAEEVIGFLRXXXXXXXX 961
            YQ+   ++ +EFAF++MR+  IVC +AY++MITIY RM LYD+AEEVI  ++        
Sbjct: 245  YQKKCDIKESEFAFNQMRNFGIVCETAYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNL 304

Query: 962  XXXXXXXXAYSQQGKLDEAEEVLLSMGSAGFSPNIVAYNTLITGYGKVSNMDAAQRLCHE 1141
                    AY QQGK++EAE V  SM  AGFS NI+AYNTLITGYGK SNMD AQRL   
Sbjct: 305  ENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLG 364

Query: 1142 LGNVGLEPDETTCRSMIEGWGRVNNYKEAKWYYAKLKRLGFMPNSSNLFTMINLQAKHKD 1321
            + N G+EPDETT RSMIEGWGR  NYK A+WYY +LKR G+MPNSSNLFT+INLQAKH+D
Sbjct: 365  IKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKELKRRGYMPNSSNLFTLINLQAKHED 424

Query: 1322 EEGVLRTIDDMMKIGCQKSSVLGIVLQVYEKAERFEKVPHILKGSLYDHVLKNQTSCSVL 1501
            E G L+T++DM+KIGC+ SS++G VLQ YEKA R + VP +L GS Y  VL +QTSCS+L
Sbjct: 425  EAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRMKSVPVLLTGSFYRKVLSSQTSCSIL 484

Query: 1502 VLAYVKNCLISDALRVLEEKQWQDSVFEDNLYHLLICTCKELGHLESAIKIFTFMPKSIE 1681
            V+AYVK+CL+ DAL+VL EK+W+D  FE+NLYHLLIC+CKELGHLE+AIKI+T +PK   
Sbjct: 485  VMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLLICSCKELGHLENAIKIYTQLPKREN 544

Query: 1682 KPNLHISCTLIDIFSTMGLFDEAENLYLKLKESDIGLDVIAFSVVIRMYAKSGCFEKACL 1861
            KPNLHI+CT+IDI+S MG F + E LYL L+ S I LD+IA++VV+RMY K+G  E AC 
Sbjct: 545  KPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACS 604

Query: 1862 VLEAMEKQKNLVADVYLLRDMFRIYQRCGMLYKLKDLYYRTLKTGIIWDQEMYNCVINCC 2041
            VL+ M +Q+++V D+YLLRDM RIYQRCGM++KL DLYYR LK+G+ WDQEMYNCVINCC
Sbjct: 605  VLDLMAEQQDIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCC 664

Query: 2042 ARALPVDELSKLFDEMLQHGFAPNVITINVMLDVYGRSGLFKRAWKVFWMAKKRGLIDVV 2221
            +RALPVDELS+LFDEMLQ GFAPN +T+NVMLDVYG+S LF +A  +F +A+KRGL+D +
Sbjct: 665  SRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAI 724

Query: 2222 SYNTMIAAYGQNKDFKNMSETVKKMQFNGFSVSLEAYNCMLDAYGKKGEMEKFRNVLQRL 2401
            SYNTMI+ YG+NKDFKNMS TV+KM+FNGFSVSLEAYNCMLDAYGK+ +ME FR+VLQR+
Sbjct: 725  SYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRM 784

Query: 2402 RDSSCVSDCYTYNIMINIYGEQRWIEELSDVLTELEALEIGLDLCGYNTLIKAYGIAGMV 2581
            +++S   D YTYNIMINIYGEQ WI+E+++VLTEL+A  +  DL  YNTLIKAYGIAGMV
Sbjct: 785  QETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMV 844

Query: 2582 EEAVGLVKEMREKGIEPDQVTYINLINALRKNDMFLEAVKWSLWMKQM 2725
            EEA  LVKEMREK IEPD++TYIN+I AL++ND FLEAVKWSLWMKQM
Sbjct: 845  EEAAQLVKEMREKRIEPDRITYINMIRALQRNDQFLEAVKWSLWMKQM 892


>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297315195|gb|EFH45618.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 906

 Score =  989 bits (2558), Expect = 0.0
 Identities = 500/911 (54%), Positives = 653/911 (71%), Gaps = 10/911 (1%)
 Frame = +2

Query: 29   LEPFSISLFPGCLHISGACVVRPFSSLQPIKVSHVETEF-SDDIESSFVDNVISESNDDV 205
            L+PF    F    H S      PF     + +  V T   +  I S      I  S  D+
Sbjct: 10   LDPFDSKRF----HFSA----NPFQFPDQVPIFSVSTSVPATRIGSLIRVKKIRVSRLDI 61

Query: 206  GSK----SLDSESLNFGGSSRKRGVSVWKRFRVVKKGENNNKAKEVENGITTYRG----D 361
             +K    ++DS+S+N   SS  +     K    V  G      K+V    +  R     +
Sbjct: 62   EAKEAENAIDSDSVNVERSSNSK----LKGSNTVTSGNQRGTKKDVARKFSFRRESNDLE 117

Query: 362  IFNSWLDN-KTTANFDVWNLESELSLDRCNVLLKQLERSSDDKALGFFEWMRINGKLKWN 538
            + N +++N +   N+    ++  LSL+  N +LK+LE  SD  A+ FF+WMR  GKL+ N
Sbjct: 118  LENLFVNNGEMDVNYSA--IKPGLSLEHYNAILKRLESCSDTNAIKFFDWMRCKGKLEGN 175

Query: 539  LNAYNLIFRVLGRRGDWHRAEKMIREITADSGCELKCQIFNTIIYACHKRGLTDLGAKWF 718
              AY+LI RVLGRR +W+RAE +I E+    G +   Q+FNT+IYAC K+G   L +KWF
Sbjct: 176  FGAYSLILRVLGRREEWNRAEDLIEELCGFQGFQQSFQVFNTVIYACTKKGNVKLASKWF 235

Query: 719  RMMLDNGVRPNIATFGMLMSLYQRSWRVEPAEFAFSKMRDLNIVCHSAYSAMITIYTRMG 898
            +MML+ GVRPN+AT GMLM LYQ++W V+ AEFAFS MR   IVC SAYS+MITIYTR+ 
Sbjct: 236  QMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRKFEIVCESAYSSMITIYTRLR 295

Query: 899  LYDRAEEVIGFLRXXXXXXXXXXXXXXXXAYSQQGKLDEAEEVLLSMGSAGFSPNIVAYN 1078
            LY++AEEVI  ++                AYSQQGK+++AE VL+SM +AGF+PNI+AYN
Sbjct: 296  LYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLISMEAAGFAPNIIAYN 355

Query: 1079 TLITGYGKVSNMDAAQRLCHELGNVGLEPDETTCRSMIEGWGRVNNYKEAKWYYAKLKRL 1258
            TLITGYGKVS M+AA+ L H L ++GLEPDET+ RSMIEGWGR +NY+EA  YY +LKR 
Sbjct: 356  TLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRADNYEEANHYYQELKRC 415

Query: 1259 GFMPNSSNLFTMINLQAKHKDEEGVLRTIDDMMKIGCQKSSVLGIVLQVYEKAERFEKVP 1438
            G+ PNSSNLFT+INLQAK+ D +G ++TI+DM  IGCQ  S+LGI+LQ YEK  + + VP
Sbjct: 416  GYKPNSSNLFTLINLQAKYGDRDGAIKTIEDMTSIGCQYPSILGIILQAYEKVGKIDVVP 475

Query: 1439 HILKGSLYDHVLKNQTSCSVLVLAYVKNCLISDALRVLEEKQWQDSVFEDNLYHLLICTC 1618
            ++LKGS ++H+  NQTS S+LV+AY+K+ ++ D L +L EK+W+DS FE +LYHLLIC+C
Sbjct: 476  YLLKGSFHNHIRLNQTSFSILVMAYIKHGMVDDCLALLREKKWRDSAFESHLYHLLICSC 535

Query: 1619 KELGHLESAIKIFTFMPKSIEKPNLHISCTLIDIFSTMGLFDEAENLYLKLKESDIGLDV 1798
            KE G L  A+K++    +S E+ NLHI+ T+IDI++ MG F EAE LYL LK S + LD 
Sbjct: 536  KESGQLTDAVKLYNHTMESDEEINLHITSTMIDIYTVMGEFGEAEKLYLNLKSSGVVLDR 595

Query: 1799 IAFSVVIRMYAKSGCFEKACLVLEAMEKQKNLVADVYLLRDMFRIYQRCGMLYKLKDLYY 1978
            I FS+V+RMY K+G  E+AC VLE M++QK++V DVYL RDM RIYQ+C +  KL+ LYY
Sbjct: 596  IGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYY 655

Query: 1979 RTLKTGIIWDQEMYNCVINCCARALPVDELSKLFDEMLQHGFAPNVITINVMLDVYGRSG 2158
            R  K+GI WDQEMYNCVINCCARALP+DELS+ F+EM+++GF PN +T NV+LDVYG++ 
Sbjct: 656  RIQKSGIHWDQEMYNCVINCCARALPLDELSRTFEEMIRYGFTPNTVTFNVLLDVYGKAK 715

Query: 2159 LFKRAWKVFWMAKKRGLIDVVSYNTMIAAYGQNKDFKNMSETVKKMQFNGFSVSLEAYNC 2338
            LFK+  ++F +AK+ G++DV+SYNT+IAAYG+NKDF NMS  +K MQF+GFSVSLEAYN 
Sbjct: 716  LFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDFTNMSSAIKNMQFDGFSVSLEAYNT 775

Query: 2339 MLDAYGKKGEMEKFRNVLQRLRDSSCVSDCYTYNIMINIYGEQRWIEELSDVLTELEALE 2518
            +LDAYGK  +MEKFR++L+R++ S+   D YTYNIMINIYGEQ WI+E++ VL EL+   
Sbjct: 776  LLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLKELKESG 835

Query: 2519 IGLDLCGYNTLIKAYGIAGMVEEAVGLVKEMREKGIEPDQVTYINLINALRKNDMFLEAV 2698
            +G DLC YNTLIKAYGI GMVEEAVGLVKEMR K I PD+VTY NL+ ALRKND FLEA+
Sbjct: 836  LGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNLVTALRKNDEFLEAI 895

Query: 2699 KWSLWMKQMGL 2731
            KWSLWMKQMG+
Sbjct: 896  KWSLWMKQMGI 906


>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635625|sp|O65567.2|PP342_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g30825, chloroplastic; Flags: Precursor
            gi|332660415|gb|AEE85815.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  976 bits (2522), Expect = 0.0
 Identities = 471/767 (61%), Positives = 595/767 (77%)
 Frame = +2

Query: 431  SLDRCNVLLKQLERSSDDKALGFFEWMRINGKLKWNLNAYNLIFRVLGRRGDWHRAEKMI 610
            SL+ CN +LK+LE  SD  A+ FF+WMR NGKL  N  AY+LI RVLGRR +W RAE +I
Sbjct: 138  SLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLI 197

Query: 611  REITADSGCELKCQIFNTIIYACHKRGLTDLGAKWFRMMLDNGVRPNIATFGMLMSLYQR 790
            +E+      +   Q+FNT+IYAC K+G   L +KWF MML+ GVRPN+AT GMLM LYQ+
Sbjct: 198  KELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQK 257

Query: 791  SWRVEPAEFAFSKMRDLNIVCHSAYSAMITIYTRMGLYDRAEEVIGFLRXXXXXXXXXXX 970
            +W VE AEFAFS MR   IVC SAYS+MITIYTR+ LYD+AEEVI  ++           
Sbjct: 258  NWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENW 317

Query: 971  XXXXXAYSQQGKLDEAEEVLLSMGSAGFSPNIVAYNTLITGYGKVSNMDAAQRLCHELGN 1150
                 AYSQQGK++ AE +L+SM +AGFSPNI+AYNTLITGYGK+  M+AAQ L H L N
Sbjct: 318  LVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCN 377

Query: 1151 VGLEPDETTCRSMIEGWGRVNNYKEAKWYYAKLKRLGFMPNSSNLFTMINLQAKHKDEEG 1330
            +GLEPDET+ RSMIEGWGR +NY+EAK YY +LKR G+ PNS NLFT+INLQAK+ D +G
Sbjct: 378  IGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDG 437

Query: 1331 VLRTIDDMMKIGCQKSSVLGIVLQVYEKAERFEKVPHILKGSLYDHVLKNQTSCSVLVLA 1510
             ++TI+DM  IGCQ SS+LGI+LQ YEK  + + VP +LKGS ++H+  NQTS S LV+A
Sbjct: 438  AIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMA 497

Query: 1511 YVKNCLISDALRVLEEKQWQDSVFEDNLYHLLICTCKELGHLESAIKIFTFMPKSIEKPN 1690
            YVK+ ++ D L +L EK+W+DS FE +LYHLLIC+CKE G L  A+KI+    +S E+ N
Sbjct: 498  YVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEIN 557

Query: 1691 LHISCTLIDIFSTMGLFDEAENLYLKLKESDIGLDVIAFSVVIRMYAKSGCFEKACLVLE 1870
            LHI+ T+IDI++ MG F EAE LYL LK S + LD I FS+V+RMY K+G  E+AC VLE
Sbjct: 558  LHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617

Query: 1871 AMEKQKNLVADVYLLRDMFRIYQRCGMLYKLKDLYYRTLKTGIIWDQEMYNCVINCCARA 2050
             M++QK++V DVYL RDM RIYQ+C +  KL+ LYYR  K+GI W+QEMYNCVINCCARA
Sbjct: 618  IMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARA 677

Query: 2051 LPVDELSKLFDEMLQHGFAPNVITINVMLDVYGRSGLFKRAWKVFWMAKKRGLIDVVSYN 2230
            LP+DELS  F+EM+++GF PN +T NV+LDVYG++ LFK+  ++F +AK+ G++DV+SYN
Sbjct: 678  LPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYN 737

Query: 2231 TMIAAYGQNKDFKNMSETVKKMQFNGFSVSLEAYNCMLDAYGKKGEMEKFRNVLQRLRDS 2410
            T+IAAYG+NKD+ NMS  +K MQF+GFSVSLEAYN +LDAYGK  +MEKFR++L+R++ S
Sbjct: 738  TIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKS 797

Query: 2411 SCVSDCYTYNIMINIYGEQRWIEELSDVLTELEALEIGLDLCGYNTLIKAYGIAGMVEEA 2590
            +   D YTYNIMINIYGEQ WI+E++DVL EL+   +G DLC YNTLIKAYGI GMVEEA
Sbjct: 798  TSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEA 857

Query: 2591 VGLVKEMREKGIEPDQVTYINLINALRKNDMFLEAVKWSLWMKQMGL 2731
            VGLVKEMR + I PD+VTY NL+ ALR+ND FLEA+KWSLWMKQMG+
Sbjct: 858  VGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904