BLASTX nr result

ID: Cephaelis21_contig00012585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012585
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   330   4e-88
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   325   7e-87
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   315   1e-83
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   290   3e-76
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   289   7e-76

>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  330 bits (845), Expect = 4e-88
 Identities = 167/191 (87%), Positives = 171/191 (89%), Gaps = 1/191 (0%)
 Frame = +2

Query: 77  KGIMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR 256
           + IMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR
Sbjct: 54  RSIMRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR 113

Query: 257 LHGKDMTQDSTFEFERKRNRPERYDRNVTENTLKAIKKIDKVRVDREARHHALRMKGKKA 436
           LHGKDMTQDSTFEFERKRNRPERYDRNV ENTLKAIKKIDKVRVDREARHHALRMKGKKA
Sbjct: 114 LHGKDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKA 173

Query: 437 SEQREAAKELEQSIHMIKAPAVLQQEPSLTAPKIKVKVSQQQSEAIR-MEE*LHHYCIPF 613
            EQREAAKELEQSIHM+KAPAVLQQEPSLT PKIKVKVSQQQSE    MEE    Y  P 
Sbjct: 174 KEQREAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSEENHAMEECFSTYTRPH 233

Query: 614 IPPSNFPLFSS 646
             PS+  + SS
Sbjct: 234 --PSSITVRSS 242


>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  325 bits (834), Expect = 7e-87
 Identities = 157/161 (97%), Positives = 158/161 (98%)
 Frame = +2

Query: 86  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 265
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 266 KDMTQDSTFEFERKRNRPERYDRNVTENTLKAIKKIDKVRVDREARHHALRMKGKKASEQ 445
           KDMTQDSTFEFERKRNRPERYDRNV ENTLKAIKKIDKVRVDREARHHALRMKGKKA EQ
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 446 REAAKELEQSIHMIKAPAVLQQEPSLTAPKIKVKVSQQQSE 568
           REAAKELEQSIHM+KAPAVLQQEPSLT PKIKVKVSQQQSE
Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLPKIKVKVSQQQSE 161


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  315 bits (807), Expect = 1e-83
 Identities = 150/161 (93%), Positives = 156/161 (96%)
 Frame = +2

Query: 86  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 265
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 266 KDMTQDSTFEFERKRNRPERYDRNVTENTLKAIKKIDKVRVDREARHHALRMKGKKASEQ 445
           KDMTQDSTFEFERKRNRPERYDRN+ ENTLKAIKKIDKVRVDREARHHALRMKGKKA EQ
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 446 REAAKELEQSIHMIKAPAVLQQEPSLTAPKIKVKVSQQQSE 568
           REAAKELEQ IHM+KAPAVL++EPSLT PKIKVKVS+ Q+E
Sbjct: 121 REAAKELEQGIHMVKAPAVLEKEPSLTLPKIKVKVSRPQAE 161


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  290 bits (743), Expect = 3e-76
 Identities = 138/161 (85%), Positives = 146/161 (90%)
 Frame = +2

Query: 86  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 265
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 266 KDMTQDSTFEFERKRNRPERYDRNVTENTLKAIKKIDKVRVDREARHHALRMKGKKASEQ 445
           KDMTQDSTFEFERKRNRPERYDRN+ EN LKAI KIDK+RV RE RHH  RMKGKK    
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 446 REAAKELEQSIHMIKAPAVLQQEPSLTAPKIKVKVSQQQSE 568
           +EA KELEQ I ++KAP+VLQQ+PSLT PKIKVKVSQQQSE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSE 161


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  289 bits (739), Expect = 7e-76
 Identities = 136/161 (84%), Positives = 145/161 (90%)
 Frame = +2

Query: 86  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 265
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 266 KDMTQDSTFEFERKRNRPERYDRNVTENTLKAIKKIDKVRVDREARHHALRMKGKKASEQ 445
           KDMTQDSTFEFERKRNRPERYDRN+ EN LK I KIDK+RV RE RHH  RMKGKK    
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 446 REAAKELEQSIHMIKAPAVLQQEPSLTAPKIKVKVSQQQSE 568
           +EA KELEQ I ++KAP+VLQQ+PSLT PKIKVKVSQQQSE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLPKIKVKVSQQQSE 161


Top