BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00012457
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   204   1e-50
ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45
gb|ABK94132.1| unknown [Populus trichocarpa]                          188   1e-45
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi...   185   9e-45
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb...   185   9e-45

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  204 bits (520), Expect = 1e-50
 Identities = 98/131 (74%), Positives = 113/131 (86%)
 Frame = +2

Query: 2   YDWEKKQHFALSATEVGSMINMGPKDSCEFFHDPAMLSSNSGQVRKSLSIKPHLDGSGYF 181
           YDWEK+Q FALSATEVGS+I+MG +DS EFFHDP+MLSSN+GQVRKSLSIKP+ DGSGYF
Sbjct: 108 YDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYF 167

Query: 182 FSLSVVNNVLKTNDRFVVPVTAAEFAVMRTAFNFALPRIMGWDQYNNQPFGSTNNSSSKV 361
            SLSVVNN LKTNDRF VPVT AEFAVMRTAF+FALP IMGWD++ N+P  S + S SKV
Sbjct: 168 ISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPSESISQSPSKV 227

Query: 362 LPQSINEEWDK 394
           +PQ +  EWD+
Sbjct: 228 VPQLMEAEWDR 238


>ref|XP_002303313.1| predicted protein [Populus trichocarpa] gi|222840745|gb|EEE78292.1|
           predicted protein [Populus trichocarpa]
          Length = 183

 Score =  188 bits (477), Expect = 1e-45
 Identities = 91/131 (69%), Positives = 107/131 (81%)
 Frame = +2

Query: 2   YDWEKKQHFALSATEVGSMINMGPKDSCEFFHDPAMLSSNSGQVRKSLSIKPHLDGSGYF 181
           YD+EK+Q FALSATEVGS+I+ GPKDSCEFFHDP+MLSSN+GQVRK+LSIKPH DGSGYF
Sbjct: 53  YDYEKRQKFALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYF 112

Query: 182 FSLSVVNNVLKTNDRFVVPVTAAEFAVMRTAFNFALPRIMGWDQYNNQPFGSTNNSSSKV 361
            SLSVVNN+LKT +RF VPVT AEF V++TA +FALP IMGWD+      G+  +  SKV
Sbjct: 113 VSLSVVNNILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKV 172

Query: 362 LPQSINEEWDK 394
            PQ  + EWDK
Sbjct: 173 DPQMPDLEWDK 183


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  188 bits (477), Expect = 1e-45
 Identities = 91/131 (69%), Positives = 107/131 (81%)
 Frame = +2

Query: 2   YDWEKKQHFALSATEVGSMINMGPKDSCEFFHDPAMLSSNSGQVRKSLSIKPHLDGSGYF 181
           YD+EK+Q FALSATEVGS+I+ GPKDSCEFFHDP+MLSSN+GQVRK+LSIKPH DGSGYF
Sbjct: 99  YDYEKRQKFALSATEVGSLISTGPKDSCEFFHDPSMLSSNAGQVRKNLSIKPHADGSGYF 158

Query: 182 FSLSVVNNVLKTNDRFVVPVTAAEFAVMRTAFNFALPRIMGWDQYNNQPFGSTNNSSSKV 361
            SLSVVNN+LKT +RF VPVT AEF V++TA +FALP IMGWD+      G+  +  SKV
Sbjct: 159 VSLSVVNNILKTTERFTVPVTTAEFTVLKTACSFALPHIMGWDRLTTPLPGTLASKLSKV 218

Query: 362 LPQSINEEWDK 394
            PQ  + EWDK
Sbjct: 219 DPQMPDLEWDK 229


>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
           gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
           Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
           Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
          Length = 178

 Score =  185 bits (469), Expect = 9e-45
 Identities = 88/109 (80%), Positives = 99/109 (90%)
 Frame = +2

Query: 2   YDWEKKQHFALSATEVGSMINMGPKDSCEFFHDPAMLSSNSGQVRKSLSIKPHLDGSGYF 181
           YDWEK+Q FALSATEVGS+I+MG +DS EFFHDP+MLSSN+GQVRKSLSIKP+ DGSGYF
Sbjct: 62  YDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYF 121

Query: 182 FSLSVVNNVLKTNDRFVVPVTAAEFAVMRTAFNFALPRIMGWDQYNNQP 328
            SLSVVNN LKTNDRF VPVT AEFAVMRTAF+FALP IMGWD++ N+P
Sbjct: 122 ISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRP 170


>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
           A, Crystal Structure Of A Stwhy2-Ere32 Complex
           gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
           Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
           Crystal Structure Of A Stwhy2-Cere32 Complex
           gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
           Stwhy2-Rcere32 Complex
          Length = 178

 Score =  185 bits (469), Expect = 9e-45
 Identities = 88/109 (80%), Positives = 99/109 (90%)
 Frame = +2

Query: 2   YDWEKKQHFALSATEVGSMINMGPKDSCEFFHDPAMLSSNSGQVRKSLSIKPHLDGSGYF 181
           YDWEK+Q FALSATEVGS+I+MG +DS EFFHDP+MLSSN+GQVRKSLSIKP+ DGSGYF
Sbjct: 62  YDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYF 121

Query: 182 FSLSVVNNVLKTNDRFVVPVTAAEFAVMRTAFNFALPRIMGWDQYNNQP 328
            SLSVVNN LKTNDRF VPVT AEFAVMRTAF+FALP IMGWD++ N+P
Sbjct: 122 ISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRP 170