BLASTX nr result
ID: Cephaelis21_contig00012136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00012136
(794 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi... 163 4e-38
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera] 163 4e-38
ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi... 162 6e-38
ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|2... 155 7e-36
ref|XP_002533731.1| pentatricopeptide repeat-containing protein,... 152 1e-34
>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
protein product [Vitis vinifera]
Length = 821
Score = 163 bits (413), Expect = 4e-38
Identities = 74/109 (67%), Positives = 92/109 (84%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
RQGLMQEAI SEMT GI PCIVTYNTFV+G++G+G+FSEV+E++ YMIQH+CRPNEL
Sbjct: 712 RQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNEL 771
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRERDPSYDEQSLQRLAVRVRESVE 467
TYK +VDGYCK K+Y +A+DFVS I E D S+D+QSL+RL R+RE +E
Sbjct: 772 TYKIVVDGYCKGKKYKEAMDFVSNITEMDKSFDDQSLRRLTFRIREHME 820
Score = 60.1 bits (144), Expect = 5e-07
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
+ G+ EA+S+ EM P +VTYN V+ + G E + + MI+ PN +
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRE 533
TY T+++ Y KA + + AL F +++E
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKE 413
Score = 57.0 bits (136), Expect = 5e-06
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
R+GL+ EA F+ + S G TYN+ + F G++SE +L M ++NC P+ +
Sbjct: 292 REGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLV 351
Query: 613 TYKTIVDGYCKAKRYNDALDFV 548
TY +V Y +A + + DF+
Sbjct: 352 TYNELVAAYVRAGFHEEGADFI 373
>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 163 bits (413), Expect = 4e-38
Identities = 74/109 (67%), Positives = 92/109 (84%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
RQGLMQEAI SEMT GI PCIVTYNTFV+G++G+G+FSEV+E++ YMIQH+CRPNEL
Sbjct: 712 RQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNEL 771
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRERDPSYDEQSLQRLAVRVRESVE 467
TYK +VDGYCK K+Y +A+DFVS I E D S+D+QSL+RL R+RE +E
Sbjct: 772 TYKIVVDGYCKGKKYKEAMDFVSNITEMDKSFDDQSLRRLTFRIREHME 820
Score = 60.1 bits (144), Expect = 5e-07
Identities = 28/87 (32%), Positives = 47/87 (54%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
+ G+ EA+S+ EM P +VTYN V+ + G E + + MI+ PN +
Sbjct: 327 KAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAI 386
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRE 533
TY T+++ Y KA + + AL F +++E
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKE 413
Score = 57.0 bits (136), Expect = 5e-06
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
R+GL+ EA F+ + S G TYN+ + F G++SE +L M ++NC P+ +
Sbjct: 292 REGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLV 351
Query: 613 TYKTIVDGYCKAKRYNDALDFV 548
TY +V Y +A + + DF+
Sbjct: 352 TYNELVAAYVRAGFHEEGADFI 373
>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940-like
[Cucumis sativus] gi|449507064|ref|XP_004162923.1|
PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 162 bits (411), Expect = 6e-38
Identities = 74/110 (67%), Positives = 91/110 (82%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
RQGLMQEAI + SEMT+RGICPCI TYNTFVSG+AGRG+F+EVDE++ YMIQ NC+PNEL
Sbjct: 735 RQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNEL 794
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRERDPSYDEQSLQRLAVRVRESVES 464
TYK IVDGYCKA++Y DA+DF+ I+ D S+D S QRLA VR+ + +
Sbjct: 795 TYKIIVDGYCKARKYQDAMDFIFGIKNIDDSFDNHSTQRLASHVRDMMNT 844
>ref|XP_002329666.1| predicted protein [Populus trichocarpa] gi|222870547|gb|EEF07678.1|
predicted protein [Populus trichocarpa]
Length = 821
Score = 155 bits (393), Expect = 7e-36
Identities = 70/110 (63%), Positives = 92/110 (83%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
RQGLM EA+ SEM SRGI PCIVTYNTFV G+A +G+F+E+DE+L YM +H+CRPNEL
Sbjct: 712 RQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNEL 771
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRERDPSYDEQSLQRLAVRVRESVES 464
TYK +VDGYCKAK++ +A+DFVS I + D S+D QS++RL+ RVRE+++S
Sbjct: 772 TYKIVVDGYCKAKKFKEAMDFVSTITDIDDSFDYQSMRRLSSRVRENMQS 821
Score = 58.2 bits (139), Expect = 2e-06
Identities = 28/87 (32%), Positives = 45/87 (51%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
R+GL+ EA F + S+G P VTYN + F G++SE ++ M +NC P+ +
Sbjct: 292 REGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAV 351
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRE 533
TY +V Y +A Y + + + E
Sbjct: 352 TYNELVAAYVRAGFYEEGAALIDTMTE 378
Score = 57.4 bits (137), Expect = 4e-06
Identities = 26/87 (29%), Positives = 47/87 (54%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
+ G+ EA+S+ EM P VTYN V+ + G + E L+ M ++ +PN +
Sbjct: 327 KAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAV 386
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRE 533
TY T+++ Y +A + + AL +++E
Sbjct: 387 TYTTMINAYGRAAQVDKALSLYDQMKE 413
>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 835
Score = 152 bits (383), Expect = 1e-34
Identities = 66/110 (60%), Positives = 92/110 (83%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
R+GLMQE I + SEMTS G+ PCI TYNTF+SG+A +G+F+E+++++ YMI HNCRPNEL
Sbjct: 725 RKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNEL 784
Query: 613 TYKTIVDGYCKAKRYNDALDFVSKIRERDPSYDEQSLQRLAVRVRESVES 464
TYK + DGYCKA+RY++A+DFVSKI++ D ++ +QS++RL RVR +ES
Sbjct: 785 TYKIVADGYCKARRYDEAIDFVSKIKDVDDTFGDQSVRRLVSRVRNYLES 834
Score = 58.5 bits (140), Expect = 2e-06
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = -2
Query: 793 RQGLMQEAISLFSEMTSRGICPCIVTYNTFVSGFAGRGLFSEVDELLGYMIQHNCRPNEL 614
R+GL+ EA FS + S G P VTYN + F G+FSE +L M ++NC P+ +
Sbjct: 305 REGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAV 364
Query: 613 TYKTIVDGYCKA 578
TY +V Y +A
Sbjct: 365 TYNEVVAAYVRA 376