BLASTX nr result

ID: Cephaelis21_contig00011972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011972
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|2...   182   2e-43
ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinif...   182   2e-43
ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit c...   180   5e-43
ref|XP_003592786.1| Macrophage erythroblast attacher [Medicago t...   180   6e-43
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]     174   3e-41

>ref|XP_002323828.1| predicted protein [Populus trichocarpa] gi|222866830|gb|EEF03961.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score =  182 bits (461), Expect = 2e-43
 Identities = 89/113 (78%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
 Frame = -3

Query: 534 TIRQVKLDKECELRIEVA-DTPFRLRVLNGTAEIFGTEIPPEIWLSFPPRHKFAVFTWYG 358
           T RQVKL+KE ELRIEVA DTP RLR+LNGTAEIFGTE+PP+IWL+FPP  KFAVFTWYG
Sbjct: 11  TTRQVKLEKESELRIEVANDTPLRLRLLNGTAEIFGTELPPQIWLTFPPHFKFAVFTWYG 70

Query: 357 GTIEMDGTTETDYIADETPMISYVNVHAVLEGRRNQAKASPSDSDASQVVCYS 199
            TIEMDG+TETDY ADETPM+SYVNVHAVL+GRRNQAKASP  S    V C S
Sbjct: 71  ATIEMDGSTETDYTADETPMVSYVNVHAVLDGRRNQAKASPESSQFLNVNCSS 123


>ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinifera]
           gi|296087785|emb|CBI35041.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  182 bits (461), Expect = 2e-43
 Identities = 91/108 (84%), Positives = 99/108 (91%), Gaps = 2/108 (1%)
 Frame = -3

Query: 531 IRQVKLDKECELRIEVADT-PFRLRVLNGTAEIFGTEIPPEIWLSFPPRHKFAVFTWYGG 355
           IRQVKL+KECELR+EV++  P RLR+LNGTAEIFGTEIPPEIWLSFPPR KFAVFTWYG 
Sbjct: 7   IRQVKLEKECELRVEVSENAPLRLRLLNGTAEIFGTEIPPEIWLSFPPRLKFAVFTWYGA 66

Query: 354 TIEMDGTTETDYIADETPMISYVNVHAVLEGRRNQAKASPS-DSDASQ 214
           TIEMDG TETDY ADETPMISYVNVHAVLEGRRN+AKAS S D++ASQ
Sbjct: 67  TIEMDGITETDYTADETPMISYVNVHAVLEGRRNRAKASSSGDAEASQ 114


>ref|XP_002517467.1| cleavage/polyadenylation factor ia subunit clp1p, putative [Ricinus
           communis] gi|223543478|gb|EEF45009.1|
           cleavage/polyadenylation factor ia subunit clp1p,
           putative [Ricinus communis]
          Length = 431

 Score =  180 bits (457), Expect = 5e-43
 Identities = 87/104 (83%), Positives = 97/104 (93%), Gaps = 1/104 (0%)
 Frame = -3

Query: 534 TIRQVKLDKECELRIEVA-DTPFRLRVLNGTAEIFGTEIPPEIWLSFPPRHKFAVFTWYG 358
           T++QVKL++E ELRIEVA DTP RLR+LNGTAEIFGTE+PPE+WL+FPPR KFAVFTWYG
Sbjct: 13  TMKQVKLERESELRIEVANDTPLRLRLLNGTAEIFGTELPPEMWLTFPPRLKFAVFTWYG 72

Query: 357 GTIEMDGTTETDYIADETPMISYVNVHAVLEGRRNQAKASPSDS 226
            TIEMDGTTETDY ADETPM+SYVNVHAVLEGRRN+AKAS SDS
Sbjct: 73  ATIEMDGTTETDYTADETPMVSYVNVHAVLEGRRNRAKASSSDS 116


>ref|XP_003592786.1| Macrophage erythroblast attacher [Medicago truncatula]
           gi|355481834|gb|AES63037.1| Macrophage erythroblast
           attacher [Medicago truncatula]
          Length = 873

 Score =  180 bits (456), Expect = 6e-43
 Identities = 83/102 (81%), Positives = 94/102 (92%)
 Frame = -3

Query: 534 TIRQVKLDKECELRIEVADTPFRLRVLNGTAEIFGTEIPPEIWLSFPPRHKFAVFTWYGG 355
           TI+QVKL+KECELRIEV+D+P RLR+LNG AEIFGTE+PPEIWL+FPPR KFAVFTWYG 
Sbjct: 18  TIKQVKLEKECELRIEVSDSPLRLRLLNGNAEIFGTELPPEIWLNFPPRLKFAVFTWYGA 77

Query: 354 TIEMDGTTETDYIADETPMISYVNVHAVLEGRRNQAKASPSD 229
           TIEMDGT ET Y ADETPM+SYVNVHA+LEGRR++AK SPSD
Sbjct: 78  TIEMDGTPETGYTADETPMVSYVNVHAILEGRRDRAKKSPSD 119


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score =  174 bits (442), Expect = 3e-41
 Identities = 86/109 (78%), Positives = 97/109 (88%), Gaps = 2/109 (1%)
 Frame = -3

Query: 534 TIRQVKLDKECELRIEVA-DTPFRLRVLNGTAEIFGTEIPPEIWLSFPPRHKFAVFTWYG 358
           TI+QVKL++E ELRIEV  D P RLR+LNGTAEIFGTE+PPEIWL+FPPR KFAVFTWYG
Sbjct: 17  TIKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIWLNFPPRLKFAVFTWYG 76

Query: 357 GTIEMDGTTETDYIADETPMISYVNVHAVLEGRRNQAKA-SPSDSDASQ 214
            TIEMDG TETDY ADETPM+SYVNVHAVL+GRR++AKA SP DS +SQ
Sbjct: 77  ATIEMDGATETDYTADETPMVSYVNVHAVLDGRRSRAKASSPDDSGSSQ 125


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