BLASTX nr result

ID: Cephaelis21_contig00011873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011873
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE46018.1| cytochrome c oxidase subunit 5C [Elaeis guineensis]     89   1e-15
ref|NP_182260.1| putative cytochrome c oxidase subunit 5C-1 [Ara...    87   5e-15
ref|XP_002880298.1| cytochrome c oxidase subunit VC family prote...    87   5e-15
ref|XP_002862722.1| cytochrome c oxidase subunit VC family prote...    87   5e-15
ref|XP_002515282.1| Cytochrome c oxidase polypeptide Vc, putativ...    86   9e-15

>gb|AGE46018.1| cytochrome c oxidase subunit 5C [Elaeis guineensis]
          Length = 63

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = -1

Query: 502 MAAHKVAHATLTGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVRAFYNLLEKGDITVV 323
           MAAHK+AHATL GPSVVKE             LWKMHHWNEQRK RAFY++LEKG+I+VV
Sbjct: 1   MAAHKIAHATLRGPSVVKEIFIGITLGLFAGSLWKMHHWNEQRKTRAFYDMLEKGEISVV 60

Query: 322 AEE 314
            EE
Sbjct: 61  VEE 63


>ref|NP_182260.1| putative cytochrome c oxidase subunit 5C-1 [Arabidopsis thaliana]
           gi|48427900|sp|O22912.1|CX5C1_ARATH RecName:
           Full=Probable cytochrome c oxidase subunit 5C-1;
           AltName: Full=Cytochrome c oxidase polypeptide Vc-1
           gi|2275216|gb|AAB63838.1| putative cytochrome c oxidase
           Vc subunit [Arabidopsis thaliana]
           gi|17979511|gb|AAL50091.1| At2g47380/T8I13.22
           [Arabidopsis thaliana] gi|20147289|gb|AAM10358.1|
           At2g47380/T8I13.22 [Arabidopsis thaliana]
           gi|330255740|gb|AEC10834.1| putative cytochrome c
           oxidase subunit 5C-1 [Arabidopsis thaliana]
          Length = 64

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 42/64 (65%), Positives = 46/64 (71%)
 Frame = -1

Query: 502 MAAHKVAHATLTGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVRAFYNLLEKGDITVV 323
           MA HKVAHATL GPSVVKE             LWKMHHWNEQRK R FY+LLE+G+I+VV
Sbjct: 1   MAGHKVAHATLKGPSVVKELFIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 322 AEEE 311
           A EE
Sbjct: 61  AAEE 64


>ref|XP_002880298.1| cytochrome c oxidase subunit VC family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326137|gb|EFH56557.1| cytochrome c
           oxidase subunit VC family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 64

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 42/64 (65%), Positives = 46/64 (71%)
 Frame = -1

Query: 502 MAAHKVAHATLTGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVRAFYNLLEKGDITVV 323
           MA HKVAHATL GPSVVKE             LWKMHHWNEQRK R FY+LLE+G+I+VV
Sbjct: 1   MAGHKVAHATLKGPSVVKELVIGLALGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 322 AEEE 311
           A EE
Sbjct: 61  AAEE 64


>ref|XP_002862722.1| cytochrome c oxidase subunit VC family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297817580|ref|XP_002876673.1|
           cytochrome c oxidase subunit VC family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297308410|gb|EFH38980.1| cytochrome c oxidase subunit
           VC family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322511|gb|EFH52932.1| cytochrome c oxidase subunit
           VC family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 64

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 42/64 (65%), Positives = 46/64 (71%)
 Frame = -1

Query: 502 MAAHKVAHATLTGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVRAFYNLLEKGDITVV 323
           MA HKVAHATL GPSVVKE             LWKMHHWNEQRK R FY+LLE+G+I+VV
Sbjct: 1   MAGHKVAHATLKGPSVVKELIIGLTLGLAAGGLWKMHHWNEQRKTRTFYDLLERGEISVV 60

Query: 322 AEEE 311
           A EE
Sbjct: 61  AAEE 64


>ref|XP_002515282.1| Cytochrome c oxidase polypeptide Vc, putative [Ricinus communis]
           gi|255559374|ref|XP_002520707.1| Cytochrome c oxidase
           polypeptide Vc, putative [Ricinus communis]
           gi|223540092|gb|EEF41669.1| Cytochrome c oxidase
           polypeptide Vc, putative [Ricinus communis]
           gi|223545762|gb|EEF47266.1| Cytochrome c oxidase
           polypeptide Vc, putative [Ricinus communis]
          Length = 63

 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 42/63 (66%), Positives = 47/63 (74%)
 Frame = -1

Query: 502 MAAHKVAHATLTGPSVVKEXXXXXXXXXXXXXLWKMHHWNEQRKVRAFYNLLEKGDITVV 323
           MA  ++AHATL GPSVVKE             LWKMHHWNEQRKVRAFY+LLEKG+I+VV
Sbjct: 1   MAGGRIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60

Query: 322 AEE 314
           AEE
Sbjct: 61  AEE 63


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