BLASTX nr result

ID: Cephaelis21_contig00011850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011850
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    92   6e-17
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...    91   1e-16
ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AE...    90   2e-16
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...    88   6e-16
ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15

>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/96 (42%), Positives = 63/96 (65%)
 Frame = -3

Query: 290 VNSVDDALGLYNEMVRMRPLPSVIGFTQLLGRVVKMQHYQATISLYRDMCVRGAPIDHYT 111
           VN++DDAL L+N M+RMRP PS++ F++LL  + +M+HY   +SLY+ M   G P + YT
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 110 MTVVINCYGLVGLVDYGFSMLGVFFKRGYIPDVTTF 3
           + ++IN +  +  + + FS+LG   K GY P   TF
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATF 127


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/95 (44%), Positives = 60/95 (63%)
 Frame = -3

Query: 287 NSVDDALGLYNEMVRMRPLPSVIGFTQLLGRVVKMQHYQATISLYRDMCVRGAPIDHYTM 108
           ++ DDAL  +N+MV M P P +  F QLL  +V+M+HY + +S+YR M   G     YT+
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 107 TVVINCYGLVGLVDYGFSMLGVFFKRGYIPDVTTF 3
           T++INC   + LV  GFS+LG  FK G+ P + TF
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITF 177


>ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AES76066.1| CCP [Medicago
           truncatula]
          Length = 556

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/94 (43%), Positives = 62/94 (65%)
 Frame = -3

Query: 287 NSVDDALGLYNEMVRMRPLPSVIGFTQLLGRVVKMQHYQATISLYRDMCVRGAPIDHYTM 108
           N +DDA+ L+N ++ M+PLPSVI F  ++G VVKM+H    ISL + M  +G     +T+
Sbjct: 63  NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122

Query: 107 TVVINCYGLVGLVDYGFSMLGVFFKRGYIPDVTT 6
           ++ INCY  +G + + FS+LG+  KRGY P+  T
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNIT 156


>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/95 (42%), Positives = 60/95 (63%)
 Frame = -3

Query: 287 NSVDDALGLYNEMVRMRPLPSVIGFTQLLGRVVKMQHYQATISLYRDMCVRGAPIDHYTM 108
           N++D+AL  +N M+ M+P PSV+ F ++L  +  M+HY   +SL + M   G P D YT+
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 107 TVVINCYGLVGLVDYGFSMLGVFFKRGYIPDVTTF 3
            +VIN +  +  VD+GFS+L   FK G+ PD  TF
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATF 147


>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/88 (43%), Positives = 60/88 (68%)
 Frame = -3

Query: 287 NSVDDALGLYNEMVRMRPLPSVIGFTQLLGRVVKMQHYQATISLYRDMCVRGAPIDHYTM 108
           +++DDA+ L+  ++ M PLPSV+ F  +LG +VKM+HY   ISL + M +RG      T+
Sbjct: 57  DAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116

Query: 107 TVVINCYGLVGLVDYGFSMLGVFFKRGY 24
           +++INCY  +G + + FS+LG+  KRGY
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGY 144


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