BLASTX nr result

ID: Cephaelis21_contig00011347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00011347
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein ...    72   5e-11
ref|XP_002530529.1| RNA binding protein, putative [Ricinus commu...    70   1e-10
ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein ...    69   3e-10
ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein ...    64   2e-08

>ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/48 (68%), Positives = 40/48 (83%)
 Frame = -2

Query: 145 VLRSSLPSPTPFISRRGIVTKLFIGGLSFYTTEKGLSEAFSQYGQVVD 2
           VL S  P P+  +S RGI TKLF+GGLS+YTT+KGLSEAFSQYGQV++
Sbjct: 16  VLPSLFPPPSRLVSYRGIATKLFVGGLSYYTTDKGLSEAFSQYGQVIE 63


>ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
           gi|223529933|gb|EEF31861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 127

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 124 SPTPFISRRGIVTKLFIGGLSFYTTEKGLSEAFSQYGQVVD 2
           SP+ F+S RGI TKLF+GGLSFYTT+KGL+EAFSQYGQVV+
Sbjct: 19  SPSLFVSYRGIATKLFVGGLSFYTTDKGLTEAFSQYGQVVE 59


>ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Cucumis sativus]
          Length = 134

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/48 (66%), Positives = 39/48 (81%)
 Frame = -2

Query: 145 VLRSSLPSPTPFISRRGIVTKLFIGGLSFYTTEKGLSEAFSQYGQVVD 2
           VL S  P P+  +S R I TKLF+GGLS+YTT+KGLSEAFSQYGQV++
Sbjct: 16  VLPSLFPPPSRLVSFRAIATKLFVGGLSYYTTDKGLSEAFSQYGQVIE 63


>ref|XP_002309412.1| predicted protein [Populus trichocarpa] gi|222855388|gb|EEE92935.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = -2

Query: 211 AALRRLSKTVIFQPSQPKYAFGVLRSSL-PSPTP-FISRRGIVTKLFIGGLSFYTTEKGL 38
           AALRR++        +  +    +R+ L  +PT  FI +RGI TKLF+GGLS YTTE GL
Sbjct: 3   AALRRIA-------GEKSFMLSSIRAKLVAAPTALFIWQRGITTKLFVGGLSIYTTENGL 55

Query: 37  SEAFSQYGQVVD 2
           SEAFSQYGQVV+
Sbjct: 56  SEAFSQYGQVVE 67


>ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|297740158|emb|CBI30340.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/45 (71%), Positives = 35/45 (77%)
 Frame = -2

Query: 136 SSLPSPTPFISRRGIVTKLFIGGLSFYTTEKGLSEAFSQYGQVVD 2
           S L  P   I  RGI +KLF+GGLSFYTTEKGLSE FSQYGQVV+
Sbjct: 18  SFLLPPALLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVE 62


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