BLASTX nr result

ID: Cephaelis21_contig00010838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010838
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...   115   1e-32
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   109   4e-28
ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp....   107   4e-21
ref|ZP_08244251.1| Hypothetical protein APO_2582 [Acetobacter po...    75   4e-14
gb|EDZ04995.1| hypothetical protein CJBH_1340 [Campylobacter jej...    80   8e-13

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score =  115 bits (289), Expect(2) = 1e-32
 Identities = 73/144 (50%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
 Frame = +2

Query: 317  FVSEPFWRGVLNPLRTTPPGGSPECRVFL---LVKRATCNQTKALTRKCFERRRLPSY*Q 487
            F S  FWRGVLNPLRTTPPGGSPECRVFL   L    TC ++KA ++       L     
Sbjct: 706  FRSRLFWRGVLNPLRTTPPGGSPECRVFLRRQLDVVLTCKRSKATSKG------LSCAFA 759

Query: 488  HSYVLALN**RWHVT-----RLLGSXXXXXXXXXXXXXXXXXXXXSLGSSAHFGCKDLIL 652
            H +  +L   +   T        G+                    SLGSSAHFGCKD +L
Sbjct: 760  HPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCWHSISSAGASLGSSAHFGCKDFLL 819

Query: 653  RRMSQQHKTRVSLVIGLDQTSHDT 724
            RRMSQQHKTRVSLVIGLDQTSHDT
Sbjct: 820  RRMSQQHKTRVSLVIGLDQTSHDT 843



 Score = 50.4 bits (119), Expect(2) = 1e-32
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +3

Query: 780 QVLLFICQGLVRFCALYRIKPHA 848
           QV LFICQGLVRFCALYRIKPHA
Sbjct: 845 QVFLFICQGLVRFCALYRIKPHA 867


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score =  109 bits (272), Expect(2) = 4e-28
 Identities = 52/59 (88%), Positives = 53/59 (89%)
 Frame = -2

Query: 177 GEDDVKSSCPLCPGRHTCYNGNYNWKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIAD 1
           G DDVKS+ PL  G HTCYNGNYN KQGCKAERIRKDCLSSDCSLQLGNMKLESLVIAD
Sbjct: 417 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIAD 475



 Score = 42.0 bits (97), Expect(2) = 4e-28
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -3

Query: 308 CVPHSRRTASDILEEGGDDV 249
           C+PHSR TASDILEEGGDDV
Sbjct: 402 CMPHSRGTASDILEEGGDDV 421



 Score =  106 bits (265), Expect = 6e-21
 Identities = 57/78 (73%), Positives = 58/78 (74%)
 Frame = -1

Query: 850 GACGLIRYNAQNLTSP*HMNNKTCP*RDGTNFHTGAAWLSSARVVRCLVKSYNERNPRFV 671
           GACGLIRYNAQNLTS                    AAWLSSARVVRCLVKSYNERNPRFV
Sbjct: 302 GACGLIRYNAQNLTS--------------------AAWLSSARVVRCLVKSYNERNPRFV 341

Query: 670 LLRHAPKDKVFATEVSRG 617
           LLRHAPK+KVFATEVSRG
Sbjct: 342 LLRHAPKEKVFATEVSRG 359


>ref|YP_588403.1| hypothetical protein ZeamMp158 [Zea mays subsp. mays]
           gi|40795104|gb|AAR91148.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 111

 Score =  107 bits (266), Expect = 4e-21
 Identities = 64/129 (49%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
 Frame = -2

Query: 402 KKTRHSGEPPGGVVRSGFST---PRQKGSETKKKVRAALTKDCQ*YTGGRWG*RXXXXXX 232
           +KTRH G+PPGGVVRSG ST   P+Q+             K C  ++ G           
Sbjct: 17  RKTRHEGQPPGGVVRSGNSTRPAPKQR-------------KRCVPHSRGT---------- 53

Query: 231 XXXXXXXXXXXXXXXXXXGEDDVKSSCPLCPGRHTCYNGNYNWKQGCKAERIRKDCLSSD 52
                             G DDVKS+ PL  G HTCYNGN N KQGCKAERIRKDCLSSD
Sbjct: 54  -----------ASEILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSD 102

Query: 51  CSLQLGNMK 25
           CSLQLGNMK
Sbjct: 103 CSLQLGNMK 111


>ref|ZP_08244251.1| Hypothetical protein APO_2582 [Acetobacter pomorum DM001]
           gi|326695170|gb|EGE46866.1| Hypothetical protein
           APO_2582 [Acetobacter pomorum DM001]
          Length = 105

 Score = 75.1 bits (183), Expect(2) = 4e-14
 Identities = 39/59 (66%), Positives = 42/59 (71%)
 Frame = -2

Query: 177 GEDDVKSSCPLCPGRHTCYNGNYNWKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIAD 1
           G DDVKSS PLCPG HTCYNG  + K G     I K  LSSDC+LQL  MK+ESLVIAD
Sbjct: 20  GGDDVKSSWPLCPGLHTCYNGGDSGKLGGDTMLISKSRLSSDCTLQLECMKVESLVIAD 78



 Score = 29.3 bits (64), Expect(2) = 4e-14
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -3

Query: 299 HSRRTASDILEEGGDDV 249
           HSR TA D  EEGGDDV
Sbjct: 8   HSRETAGDKPEEGGDDV 24


>gb|EDZ04995.1| hypothetical protein CJBH_1340 [Campylobacter jejuni subsp. jejuni
           BH-01-0142]
          Length = 71

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 38/52 (73%), Positives = 40/52 (76%)
 Frame = +3

Query: 6   RLLAIPTSCSRVAENNPN*GNLSGFAPPYSLASNCNCHCSTCVAQGIRGMMT 161
           RLLAIP SCSRVAENNPN      FAPP  +AS+C CHCSTCVA GIR MMT
Sbjct: 20  RLLAIPASCSRVAENNPNWDIFYRFAPPRGIASHCICHCSTCVALGIRAMMT 71


Top