BLASTX nr result

ID: Cephaelis21_contig00010503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00010503
         (2135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding prot...   295   4e-77
ref|XP_002305583.1| predicted protein [Populus trichocarpa] gi|2...   294   6e-77
ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   293   1e-76
gb|AFW61057.1| hypothetical protein ZEAMMB73_234884 [Zea mays]        293   1e-76
ref|XP_002518499.1| nuclear acid binding protein, putative [Rici...   292   3e-76

>sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
           Short=Poly(A)-binding protein RBP45; AltName:
           Full=RNA-binding protein 45; Short=NplRBP45
           gi|9663767|emb|CAC01237.1| RNA Binding Protein 45
           [Nicotiana plumbaginifolia]
          Length = 409

 Score =  295 bits (754), Expect = 4e-77
 Identities = 139/186 (74%), Positives = 164/186 (88%)
 Frame = +2

Query: 362 IRSLWIGDLQYWMDEQYLLSCFALTGEVVAAKVIRNKQTGQSDGYGFVEFVSHAAADRNL 541
           +RSLWIGDLQYWMDE YL +CF  TGE+V+AKVIRNKQTGQS+GYGF+EF SHAAA+  L
Sbjct: 83  VRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETIL 142

Query: 542 QTYNGTLMPNVEQPYRLNWASMGVGEKRDDTPDYTIFVGDLATDVTDYMLQETFRANYSS 721
           QTYNGTLMPNVEQ +R+NWAS+G GE+RDD+ ++TIFVGDLA DVTDY+LQETF++ YSS
Sbjct: 143 QTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHTIFVGDLAADVTDYILQETFKSVYSS 202

Query: 722 VKGAKVVTDRLTGRTKGYGFVRFGDESEQLRAMSEMNGRFCSTRPMRIGPAANKKTIEGQ 901
           V+GAKVVTDR+TGR+KGYGFV+F DESEQLRAM+EMNG  CSTRPMRIGPAANKK +   
Sbjct: 203 VRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTP 262

Query: 902 TKGSQE 919
            K + +
Sbjct: 263 QKATYQ 268



 Score = 63.9 bits (154), Expect = 2e-07
 Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
 Frame = +2

Query: 368 SLWIGDLQYWMDEQYLLSCF-ALTGEVVAAKVIRNKQTGQSDGYGFVEFVSHAAADRNLQ 544
           ++++GDL   + +  L   F ++   V  AKV+ ++ TG+S GYGFV+F   +   R + 
Sbjct: 177 TIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMT 236

Query: 545 TYNGTLMPN-------------VEQPYRLNWASMGVGEKRDDTPDYTIFVGDLATDVTDY 685
             NG L                V  P +  + +    +   D  + TIFVG L   V + 
Sbjct: 237 EMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEE 296

Query: 686 MLQETFRANYSSVKGAKVVTDRLTGRTKGYGFVRFGDESEQLRAMSEMNGRFCSTRPMRI 865
            L++ F + Y  +   K+V        K  GFV+FG  +   +A+S +NG     + +R+
Sbjct: 297 HLRQVF-SPYGELVHVKIVAG------KRCGFVQFGTRASAEQALSSLNGTQLGGQSIRL 349

Query: 866 G---PAANKKTIEGQTKGSQEALSYWG 937
                 ++K+T + Q  GS  A  Y+G
Sbjct: 350 SWGRSPSSKQTDQTQWGGSGGA--YYG 374


>ref|XP_002305583.1| predicted protein [Populus trichocarpa] gi|222848547|gb|EEE86094.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  294 bits (753), Expect = 6e-77
 Identities = 139/189 (73%), Positives = 158/189 (83%)
 Frame = +2

Query: 335 GADQNAVDGIRSLWIGDLQYWMDEQYLLSCFALTGEVVAAKVIRNKQTGQSDGYGFVEFV 514
           G      D +R+LWIGDLQYWMDE Y+ SCFA TGEV + K+IRNKQT Q +GYGF+E  
Sbjct: 40  GQPPATADEVRTLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMT 99

Query: 515 SHAAADRNLQTYNGTLMPNVEQPYRLNWASMGVGEKRDDTPDYTIFVGDLATDVTDYMLQ 694
           SH AA+R LQTYNGT MPN EQ +RLNWAS   G+KRDD+PD+TIFVGDLA DVTD+MLQ
Sbjct: 100 SHGAAERILQTYNGTPMPNGEQNFRLNWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQ 159

Query: 695 ETFRANYSSVKGAKVVTDRLTGRTKGYGFVRFGDESEQLRAMSEMNGRFCSTRPMRIGPA 874
           ETFRA++ SVKGAKVV DRLTGRTKGYGFVRFGDESEQLRAM+EMNG FCSTRPMR+G A
Sbjct: 160 ETFRAHFPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLA 219

Query: 875 ANKKTIEGQ 901
           +NKK + GQ
Sbjct: 220 SNKKAVVGQ 228



 Score = 62.8 bits (151), Expect = 4e-07
 Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
 Frame = +2

Query: 332 SGADQNAVDGIRSLWIGDLQYWMDEQYLLSCF-ALTGEVVAAKVIRNKQTGQSDGYGFVE 508
           SG D+       ++++GDL   + +  L   F A    V  AKV+ ++ TG++ GYGFV 
Sbjct: 131 SGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAHFPSVKGAKVVIDRLTGRTKGYGFVR 190

Query: 509 FVSHAAADRNLQTYNGTLMPNVEQPYRLNWASMG---VGEKRD-------------DTPD 640
           F   +   R +   NG       +P R+  AS     VG++               D  +
Sbjct: 191 FGDESEQLRAMTEMNGAFCST--RPMRVGLASNKKAVVGQQYPKASYQNPQPQNDGDPNN 248

Query: 641 YTIFVGDLATDVTDYMLQETFRANYSSVKGAKVVTDRLTGRTKGYGFVRFGDESEQLRAM 820
            TIFVG+L ++V D  L+E F   Y  +   K+         K  GFV+F D S    A+
Sbjct: 249 TTIFVGNLDSNVMDDHLKELF-GQYGQLLHVKIPAG------KRCGFVQFADRSSAEEAL 301

Query: 821 SEMNGRFCSTRPMRIGPAANKKTIEGQTKGSQEALSYWG 937
             +NG   S + +R+    N    + Q   +Q    Y+G
Sbjct: 302 KMLNGAQLSGQNIRLSWGRNPSNKQAQPDANQYGGGYYG 340


>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  293 bits (751), Expect = 1e-76
 Identities = 141/181 (77%), Positives = 158/181 (87%), Gaps = 1/181 (0%)
 Frame = +2

Query: 362 IRSLWIGDLQYWMDEQYLLSCFALTGEVVAAKVIRNKQTGQSDGYGFVEFVSHAAADRNL 541
           IRSLWIGDLQ WM+E YL  CF+ TGEVV+ KVIRNKQTGQ +GYGF+E  + AAA+R L
Sbjct: 89  IRSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERIL 148

Query: 542 QTYNGTLMPNVEQPYRLNWASMGVGEKR-DDTPDYTIFVGDLATDVTDYMLQETFRANYS 718
           QTYNGTLMPN EQ +RLNWA++G GE+R DDTPDYTIFVGDLA+DVTDY+LQETFR +Y 
Sbjct: 149 QTYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYP 208

Query: 719 SVKGAKVVTDRLTGRTKGYGFVRFGDESEQLRAMSEMNGRFCSTRPMRIGPAANKKTIEG 898
           SVKGAKVVTDR TGR+KGYGFVRFGDE EQLRAM+EMNG FCSTRPMRIGPAA KK + G
Sbjct: 209 SVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGG 268

Query: 899 Q 901
           Q
Sbjct: 269 Q 269


>gb|AFW61057.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
          Length = 322

 Score =  293 bits (750), Expect = 1e-76
 Identities = 144/195 (73%), Positives = 164/195 (84%)
 Frame = +2

Query: 362 IRSLWIGDLQYWMDEQYLLSCFALTGEVVAAKVIRNKQTGQSDGYGFVEFVSHAAADRNL 541
           +R+LWIGDLQYWMD+ Y+  CFA TGEV   K+IR+K TGQ  GYGF+EF+S AAA+R L
Sbjct: 120 VRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAERVL 179

Query: 542 QTYNGTLMPNVEQPYRLNWASMGVGEKRDDTPDYTIFVGDLATDVTDYMLQETFRANYSS 721
           QTYNGT+MPNVE P+RLNWAS   GEKRDDTPDYTIFVGDLA DVTDY+LQETFRA+Y S
Sbjct: 180 QTYNGTMMPNVELPFRLNWAS--AGEKRDDTPDYTIFVGDLAADVTDYVLQETFRAHYPS 237

Query: 722 VKGAKVVTDRLTGRTKGYGFVRFGDESEQLRAMSEMNGRFCSTRPMRIGPAANKKTIEGQ 901
           VKGAKVVTD+LT RTKGYGFV+FGD +EQ RAM+EMNG  CS+RPMRIGPAANKK    Q
Sbjct: 238 VKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVVQ 297

Query: 902 TKGSQEALSYWGLEL 946
            KG Q+AL + GLEL
Sbjct: 298 EKGYQQAL-HIGLEL 311


>ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223542344|gb|EEF43886.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 430

 Score =  292 bits (747), Expect = 3e-76
 Identities = 138/182 (75%), Positives = 155/182 (85%)
 Frame = +2

Query: 356 DGIRSLWIGDLQYWMDEQYLLSCFALTGEVVAAKVIRNKQTGQSDGYGFVEFVSHAAADR 535
           D +R+LWIGDLQYWMDE Y+ SCFA TGEV + KVIRNKQTGQ +GYGF+EF SH  A+R
Sbjct: 86  DEVRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTAER 145

Query: 536 NLQTYNGTLMPNVEQPYRLNWASMGVGEKRDDTPDYTIFVGDLATDVTDYMLQETFRANY 715
            LQTYNGT MPN EQ +RLNWAS   G+KRDDTPD+TIFVGDLA DVTDY+LQ+TFR +Y
Sbjct: 146 ILQTYNGTPMPNGEQNFRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHY 205

Query: 716 SSVKGAKVVTDRLTGRTKGYGFVRFGDESEQLRAMSEMNGRFCSTRPMRIGPAANKKTIE 895
            SVKGAKVV DRLTGRTKGYGFVRFGDESEQ+RAM++MNG FCSTRPMRIG A NK  + 
Sbjct: 206 PSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATNKNAVT 265

Query: 896 GQ 901
           GQ
Sbjct: 266 GQ 267



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 19/221 (8%)
 Frame = +2

Query: 332 SGADQNAVDGIRSLWIGDLQYWMDEQYLLSCFALT-GEVVAAKVIRNKQTGQSDGYGFVE 508
           SG D+       ++++GDL   + +  L   F +    V  AKV+ ++ TG++ GYGFV 
Sbjct: 170 SGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKGYGFVR 229

Query: 509 FVSHAAADRNLQTYNGTLMPNVEQPYRLNWA------------------SMGVGEKRDDT 634
           F   +   R +   NG       +P R+  A                  S   GE  +D 
Sbjct: 230 FGDESEQVRAMTDMNGAFCST--RPMRIGLATNKNAVTGQQYPKASYQNSQTQGENENDP 287

Query: 635 PDYTIFVGDLATDVTDYMLQETFRANYSSVKGAKVVTDRLTGRTKGYGFVRFGDESEQLR 814
            + TIFVG+L ++VTD  L+E F   Y  +   K+         K  GFV+F D S    
Sbjct: 288 NNTTIFVGNLDSNVTDDNLRELF-GRYGQLLHVKIPAG------KRCGFVQFADRSCAEE 340

Query: 815 AMSEMNGRFCSTRPMRIGPAANKKTIEGQTKGSQEALSYWG 937
           A+  +NG   S + +R+    +    + Q   +Q    Y+G
Sbjct: 341 ALRLLNGTSLSGQSIRLSWGRSPSNKQPQPDANQWNAGYYG 381


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